Gene SeAg_B3335 details

Gene Information

• Locus tag: SeAg_B3335
• Symbol: metC
• ID: 6794389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3237276
• End bp: 3238463
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642777478
• Product: cystathionine beta-lyase
• Protein accession: YP_002148083
• Protein GI: 197248430
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATA AACAGTTGGA TACCAAACTG GTAAACGCAG GACGCAGCAA AAAATACACG 
CTTGGCTCAG TGAATAGTGT GATTCAACGC GCTTCTTCAC TGGTGTTTGA CACCGTCGAG 
GCCAAAAAAC ACGCTACCCG CAATCGCGCC AACGGCGAAT TATTTTACGG ACGCCGGGGA 
ACGCTGACTC ACTTTTCGCT CCAGGAAGCC ATGTGTGAAC TGGAAGGCGG CGCCGGATGC 
GCGCTCTTCC CGTGCGGCGC GGCGGCGGTC GCCAACACCA TTCTGGCATT CGTTGAGCAG 
GGCGACCACA TCCTGATGAC CAACACAGCC TATGAACCCA GCCAGGATTT CTGCAGCAAA 
ATTCTCGGCA AACTGGGCGT GACGACAAGC TGGTTCGACC CGCTCATCGG CGCTGATATC 
ACGCAACATA TTCAGCCGAA CACGAAAGTC GTTTTTCTGG AATCCCCCGG TTCTATTACC 
ATGGAAGTAC ATGATATTCC GACCATTGTC AGTGCGGTCA GACGCGTCGC GCCAGAAGCC 
GTCATCATGA TTGATAATAC CTGGGCGGCT GGCGTTCTGT TCAAAGCGCT GGAGTTCGAT 
ATTGATATCT CTATCCAGGC GGGCACTAAG TATCTGATTG GTCATTCTGA TGCGATGGTC 
GGGACTGCCG TTGCAAATGC GCGCTGCTGG GAACAATTGC GGGAAAACGC CTATCTGATG 
GGGCAAATGC TCGACGCCGA CACGGCTTAT ATGACCAGCC GCGGTCTGCG CACGCTCGGT 
GTCCGACTGC GCCAGCATCA AGAAAGCAGC CTCAAAATCG CCGCATGGCT GGCGAACCAT 
CCTCAGGTCG CGCGCGTTAA TCATCCGGCC CTGCCGGGTA GCAAAGGTCA TGCCTTCTGG 
AAACGAGACT TTACAGGCAG CAGCGGTTTG TTCTCCTTTG TGCTCAATAA AAAGCTGACC 
GAGGCAGAAT TATCAGCCTA TCTGGATAAC TTTTCGCTGT TCAGTATGGC CTACTCCTGG 
GGAGGCTACG AATCGCTGAT TATTGCTAAT CAGCCGGAAC AGATCGCCGC GATTCGTCCC 
GCAGGCGGCG TAGATTTTAC CGGTACGCTG GTTCGGGTGC ATATTGGTTT AGAGAGTGTT 
GATGATTTGA TCGCTGATTT AGCCGCCGGC TTCGCCAGAA TTGTGTAA 

 

Protein sequence

MTDKQLDTKL VNAGRSKKYT LGSVNSVIQR ASSLVFDTVE AKKHATRNRA NGELFYGRRG 
TLTHFSLQEA MCELEGGAGC ALFPCGAAAV ANTILAFVEQ GDHILMTNTA YEPSQDFCSK 
ILGKLGVTTS WFDPLIGADI TQHIQPNTKV VFLESPGSIT MEVHDIPTIV SAVRRVAPEA 
VIMIDNTWAA GVLFKALEFD IDISIQAGTK YLIGHSDAMV GTAVANARCW EQLRENAYLM 
GQMLDADTAY MTSRGLRTLG VRLRQHQESS LKIAAWLANH PQVARVNHPA LPGSKGHAFW 
KRDFTGSSGL FSFVLNKKLT EAELSAYLDN FSLFSMAYSW GGYESLIIAN QPEQIAAIRP 
AGGVDFTGTL VRVHIGLESV DDLIADLAAG FARIV