Gene SeAg_B2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B2436 
Symbol 
ID6793775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp2359567 
End bp2360466 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content57% 
IMG OID642776632 
Productpolysaccharide deacetylase 
Protein accessionYP_002147256 
Protein GI197249516 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAG TCGGTTTACG CATTGATGTT GATACCTTGC GAGGAACGCG TGAAGGTGTT 
CCCCGGCTGC TGGCGACATT GCATCGCCAC GGCGTTCAGG CCAGCTTTTT CTTCAGCGTC
GGGCCGGACA ATATGGGACG TCATCTTTGG CGTCTGATAA GACCGCGATT TTTATGGAAA
ATGCTACGTT CAAACGCCGC CTCGCTCTAC GGTTGGGATA TCCTGCTGGC CGGCACCGCC
TGGCCGGGAA AAAATATCGG CAACGCCAAT GCCGGGATTA TTCGTGAAAC GGCAACATAC
CATGAGACGG GACTACATGC CTGGGATCAC CATGCGTGGC AGACTCACAG CGGCCACTGG
AGTATCCGCC AGCTTGAAGA AGATATTGCA CGCGGCATAA CGGCGCTTGA GGCCATTATC
GGAAAACCCG TCACCTGCTC AGCCGCGGCT GGCTGGCGAG CGGATGGGCG CGTTGTTCGT
GCGAAAGAGC CGTTCAACCT GCGGTATAAC AGCGATTGCC GTGGAACCAC CTTATTCCGT
CCGCTACTGA TGCCGGGCCA GACAGGGACG CCGCAAATCC CGGTCACCTT ACCCACGTGG
GATGAGGTTA TCGGCCCCGC GGTTCAGGCG CAGTCGTTCA ATACCTGGAT TATCTCCCGT
ATGTTGCAGA ACAAAGGCAC GCCGGTATAT ACCATCCATG CGGAAGTCGA AGGCATTGTC
CATCAGCCGC TGTTTGAAGA TTTGCTCGTT CGTGCACGTG ACGCGGGGAT CACCTTTTGT
CCTCTGGGCG AACTGCTGCC GACATCGCCT GAGTCTCTGC CGTTGGGGCA AATTGTACGT
GGACACATCC CTGGCCGTGA AGGTTGGCTG GGGTGCCAAC AGGCAGCGAG CGCCTCATGA
 
Protein sequence
MTKVGLRIDV DTLRGTREGV PRLLATLHRH GVQASFFFSV GPDNMGRHLW RLIRPRFLWK 
MLRSNAASLY GWDILLAGTA WPGKNIGNAN AGIIRETATY HETGLHAWDH HAWQTHSGHW
SIRQLEEDIA RGITALEAII GKPVTCSAAA GWRADGRVVR AKEPFNLRYN SDCRGTTLFR
PLLMPGQTGT PQIPVTLPTW DEVIGPAVQA QSFNTWIISR MLQNKGTPVY TIHAEVEGIV
HQPLFEDLLV RARDAGITFC PLGELLPTSP ESLPLGQIVR GHIPGREGWL GCQQAASAS