| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1777 |
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| Symbol | |
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| ID | 6794067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 1732896 |
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| End bp | 1734095 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642776012 |
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| Product | type III secretion apparatus protein, YscD/HrpQ family |
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| Protein accession | YP_002146646 |
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| Protein GI | 197251452 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02500] type III secretion apparatus protein, YscD/HrpQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0349319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATC CAAAGAACTC CTGGAAAATA CGTTTTTTAG GTCACGTTTT ACAAGGCCGG
GAAGTATGGC TGAATGAAGG TAACCTGTCA CTGGGGGAGA AAGGATGCGA TATTTGTATT
CCGCTTACTA TAAATGAAAA AATTATTCTG AGAGAACAGG CAGATAGTTT ATTTGTTGAT
GCCGGGAAAG CCAGAGTTAG AGTTAATGGC CGCAGATTTA ATCCAAATAA GCCGCTACCA
TCCAGTGGGG TTTTGCAGGT TGCGGGAGTG GCTATCGCGT TTGGTAAACA GGATTGTGAA
CTTGCTGATT ATCAAATACC CGTTTCCAGA TCAGGCTACT GGTGGTTGGC TGGTGTATTC
TTGATTTTCA TCGGTGGAAT GGGTGTCCTG TTAAGTATTG GCGGTCAGCC TGAAACGGTA
AATGATTTAC CTTTGCGGGT TAAGTTTTTA TTAGACAAAA GCAATATTCA TTATGTGCGG
GCGCAATGGA AAGAAGATGG AAGCCTGCAG TTGTCCGGTT ATTGCGCGTC AAGCGAACAG
ATGCAAAAGG TGAGAGCGAC TCTCGAATCA TGGGGGGTCA TGTATCGGGA TGGTGTAATC
TGTGATGACT TATTGATACG AGAAGTGCAG GATGTTTTGA TAAAAATGGG TTACCCGCAT
GCTGAAGTAT CCAGCGAAGG GCCGGGAAGC GTGTTAATTC ATGATGATAT ACAAATGGAT
CAGCAATGGC GTAAGGTTCA ACCATTACTT GCAGATATTC CCGGGTTATT GCACTGGCAG
ATTAGTCATT CTCATCAGTC TCAGGGGGAT GATATTATTT CTGCGATAAT AGAGAACGGT
TTAGTGGGCC TTGTCAATGT TACGCCAATG CGGCGCTCTT TTGTTATCAG TGGTGTACTG
GATGAATCTC ATCAACGCAT TTTGCAAGAA ACGTTAGCAG CATTAAAGAA AAAGGACCCC
GCTCTTTCTT TAATTTATCA GGATATTGCG CCTTCTCATG ATGAAAGCAA GTATCTGCCT
GCGCCAGTGG CTGGCTTTGT ACAGAGTCGC CATGGTAATT ACTTATTACT GACGAATAAA
GAGCGTTTAC GTGTAGGGGC ATTGTTACCC AATGGGGGAG AAATTGTCCA TCTGAGTGCC
GATGTGGTAA CGATTAAACA TTATGATACT TTGATTAACT ATCCATTAGA TTTTAAGTGA
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| Protein sequence | MVNPKNSWKI RFLGHVLQGR EVWLNEGNLS LGEKGCDICI PLTINEKIIL REQADSLFVD
AGKARVRVNG RRFNPNKPLP SSGVLQVAGV AIAFGKQDCE LADYQIPVSR SGYWWLAGVF
LIFIGGMGVL LSIGGQPETV NDLPLRVKFL LDKSNIHYVR AQWKEDGSLQ LSGYCASSEQ
MQKVRATLES WGVMYRDGVI CDDLLIREVQ DVLIKMGYPH AEVSSEGPGS VLIHDDIQMD
QQWRKVQPLL ADIPGLLHWQ ISHSHQSQGD DIISAIIENG LVGLVNVTPM RRSFVISGVL
DESHQRILQE TLAALKKKDP ALSLIYQDIA PSHDESKYLP APVAGFVQSR HGNYLLLTNK
ERLRVGALLP NGGEIVHLSA DVVTIKHYDT LINYPLDFK
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