| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1626 |
|---|
| Symbol | pqaA |
|---|
| ID | 6797306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1594162 |
|---|
| End bp | 1595652 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642775862 |
|---|
| Product | PqaA protein |
|---|
| Protein accession | YP_002146498 |
|---|
| Protein GI | 197249601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4287] PhoPQ-activated pathogenicity-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.105181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATATCTCGT TGTTATCGTA CTGTTTTTTA TTTCTACAAA AGTTTATACA
CTACTTCATA ACAACATCTT CTTTTGTCGA AACAGCCCGG AGTGTGATTT GTCTCATGTT
CTCCCCGACT ACCGGGAGCA GATTTCAGGC ACACCGCTAA AATATACCTT GATTAGTACA
GCTCCATTAG CACAGGTGGT AGTCAGACAC TATGAATTAT TATCGCAACA CTGGTCGCCA
GATGACATGG TAACCCCTGC GCAATGGCGA CATAACGTTG ATATTTATAT CCCTGAAACG
GCAAAAGAGC ACCATGCTTT GGTGGTTGTA AACAACGGAA TTAATTATGA AAAAGGCGTA
CAAATCTCCA GTAAACCCGG TGATTTCTCC CAGGAAACAC TGGCAAGCAT CGCCCGTGAT
ACGAATACCA TCGTAATATC AGTGAGTGAT ATACCTAACC AATATTTAAC CTTTCAGGAT
GATAAAAAAC CATTGAAAGA GGACGAGAGC GTTTCCCGAA GCTGGGCATT ATTTATGGAA
GCGCCGGAGC AACGTGAGTT AATGCCTTTA AATATTCCTA TGGTCACTGC CATATCGCAA
GCGATGAGAT TAGCAAAAAA GGAGTTAACG CAATGGAATA TAAATTCCTT TATCATTACA
GGTATTTCAA AGCGTGGGTG GACCACCTGG TTGTCAGCTA TTGCCGATCC TGATGTTGAA
GCAATTGTTC CCTTCGCCAT TGATCTACTT GATATTGATG CTTCACTTGA GCATATTTAT
CAATCATACG GTGGAAATTG GCCCATTACA TTCTACCCCT ACTACCAGCA AGGCATAGAT
GAGAAAATAA AATCCCCCAC ATTTACCCAG CTAAGGCAAA TAATAGATCC GCTAAGATAT
CTCAACACTA TTTATCAACC CCGCCTTGCA ATACCGAAAT ATATTATTAA TGCAAGTGGC
GATGATTTTT TCGTACCAGA CAATACTCGC TTTTATTATA GCAAACTTCC TGGCGTAAAA
TCATTACGTA TAGTGCCTAA TATGAACCAC TACTCAATTA ACCAGTTCGC TGAAGAAAGC
CTCGTTCCAT TTATTAATAG GTTTCAAAGT AAAAAAACAT TACCACAGTT GATCGGCCTT
ATTCACCACC ATCTTCTTAC GGTCTATTTC TCAGAAGCGC CGGTAAAAGT CGTTCGCTGG
ACAGCCAACA ATCCAAATGC GCGTGATTTC CGTTATGCCT GTGGCATCCG CTATCAGCCG
CTTACAATAG ATATTCCCGC CAACAATAAG ATCAGTATTA CGTTAAATGA ACCGAAGACA
GGTTGGGAAG CTACCTATAT CGAAGCCACT TTTAATGATG GCTATGTCGC CACGAGTCAG
GTTTATATTA CGCCCGATGA AAAATACCCA CAGACAGCGC CACCTTCCGT TAACGCCGCA
TGTCAAACGT TACCGGGGCG TGGATTAGGG GAAAACGATA GCCCCGATTG A
|
|---|
| Protein sequence | MKKIYLVVIV LFFISTKVYT LLHNNIFFCR NSPECDLSHV LPDYREQISG TPLKYTLIST
APLAQVVVRH YELLSQHWSP DDMVTPAQWR HNVDIYIPET AKEHHALVVV NNGINYEKGV
QISSKPGDFS QETLASIARD TNTIVISVSD IPNQYLTFQD DKKPLKEDES VSRSWALFME
APEQRELMPL NIPMVTAISQ AMRLAKKELT QWNINSFIIT GISKRGWTTW LSAIADPDVE
AIVPFAIDLL DIDASLEHIY QSYGGNWPIT FYPYYQQGID EKIKSPTFTQ LRQIIDPLRY
LNTIYQPRLA IPKYIINASG DDFFVPDNTR FYYSKLPGVK SLRIVPNMNH YSINQFAEES
LVPFINRFQS KKTLPQLIGL IHHHLLTVYF SEAPVKVVRW TANNPNARDF RYACGIRYQP
LTIDIPANNK ISITLNEPKT GWEATYIEAT FNDGYVATSQ VYITPDEKYP QTAPPSVNAA
CQTLPGRGLG ENDSPD
|
|---|
| |