Gene SeAg_B1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1459 
SymbolpspF 
ID6795722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp1419567 
End bp1420562 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content54% 
IMG OID642775702 
Productphage shock protein operon transcriptional activator 
Protein accessionYP_002146338 
Protein GI197250249 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 
TIGRFAM ID[TIGR02974] psp operon transcriptional activator PspF 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.749362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATTT TCATCATGGC TGAATTTAAA GATAACCTGC TCGGCGAGGC AAACCGTTTT 
CTTGAAGTAC TGGAACAAGT CTCCCGGCTC GCGCCGCTGG ATAAGCCAGT GCTGATTATT 
GGCGAACGCG GGACGGGTAA AGAACTTATC GCCAATCGCC TGCACTATCT CTCTTCACGC 
TGGCAGGGAC CGCTTATCTC GCTTAACTGC GCGGCGCTTA ACGAAAATCT GCTGGACTCC 
GAACTGTTTG GTCATGAAGC GGGCGCTTTT ACCGGGGCGC AAAAACGTCA TCCCGGTCGC 
TTTGAACGCG CCGATGGCGG CACGCTGTTT TTGGATGAAC TGGCGACAGC GCCGATGCTG 
GTACAGGAAA AGCTACTGCG GGTGATTGAA TATGGCGAGC TAGAGCGCGT CGGCGGCAGC 
CAACCGTTAC AGGTTAATGT GCGATTAGTA TGCGCCACCA ACGCCGATTT ACCCGCCATG 
GTGAAGGAAG GGACATTTCG TGCCGATCTG CTCGACAGGC TGGCTTTTGA CGTTGTACAA 
CTGCCGCCGC TGCGCGAACG CCAAAGCGAT ATCATGCTGA TGGCCGAGCA TTTTGCTATT 
CAGATGTGTC GTGAGCTACG TCTGCCCTTA TTTCCCGGTT TTACCGATCG GGCAAAAGAA 
ACGTTGTTGC ATTACGCCTG GCCGGGTAAT GTCCGCGAGC TGAAAAACGT AGTCGAACGT 
TCAGTGTATC GCCACGGCAG CAGTGAACAT CCTTTGGATG AAATTGTTAT CGATCCTTTT 
CAACGCCATC CCGCCGAACC GCCCACGCCC GCCCTGCCAT CGGCATCCGC CACGCCTGAC 
CTGCCGCTCA ACTTGCGGGA GTTTCAACTG CAACAGGAAA AAGCGCTGCT GCAACGTAGC 
TTACAGCAGG CGAAATTTAA CCAGAAACGA GCCGCCGATT TGCTGGCACT CACCTACCAT 
CAGTTTCGCG CCTTGCTTAA AAAGCATCAG CTTTAG
 
Protein sequence
MAIFIMAEFK DNLLGEANRF LEVLEQVSRL APLDKPVLII GERGTGKELI ANRLHYLSSR 
WQGPLISLNC AALNENLLDS ELFGHEAGAF TGAQKRHPGR FERADGGTLF LDELATAPML 
VQEKLLRVIE YGELERVGGS QPLQVNVRLV CATNADLPAM VKEGTFRADL LDRLAFDVVQ 
LPPLRERQSD IMLMAEHFAI QMCRELRLPL FPGFTDRAKE TLLHYAWPGN VRELKNVVER 
SVYRHGSSEH PLDEIVIDPF QRHPAEPPTP ALPSASATPD LPLNLREFQL QQEKALLQRS 
LQQAKFNQKR AADLLALTYH QFRALLKKHQ L