Gene SeAg_B1239 details

Gene Information

• Locus tag: SeAg_B1239
• Symbol: edd
• ID: 6794463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 1225170
• End bp: 1226981
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642775500
• Product: phosphogluconate dehydratase
• Protein accession: YP_002146138
• Protein GI: 197251354
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCTA ATTTGTTACG CGTAACACAG CGTATTGTCG AACGCTCGCA GCAGACCCGA 
AAAGCCTATC TTGCCCGCAT TGAGCAGGCG AAAACCGCCA CGGTCCACCG CTCTCAACTG 
GCCTGCGGCA ACCTGGCGCA TGGCTTCGCC GCCTGTCAGC CAGAGGACAA AGTCTCGCTG 
AAAAGTATGT TGCGCAATAA TATCGCCATT ATTACCTCCT ACAATGACAT GCTCTCTGCG 
CATCAACCGT ATGAACATTA TCCGCAGATT ATTCGTCAGG CCCTGCATTC CGTGAATGCG 
GTAGGTCAGG TCGCAGGCGG CGTACCGGCA ATGTGCGATG GCGTTACGCA AGGGCAGGAT 
GGCATGGAGT TGTCATTACT CAGCCGCGAA GTGATAGCGA TGTCGGCAGC AGTAGGCCTT 
TCTCACAATA TGTTTGACGG CGCGTTATTC CTCGGCGTAT GCGACAAAAT CGTTCCGGGG 
CTGGCGATGG CCGCGCTCTC TTTTGGTCAT TTACCCGCGA TTTTTGTTCC GTCAGGCCCG 
ATGGCGAGCG GCCTGCCGAA TAAAGAAAAA GTCCGTATTC GTCAGCTATA TGCGGAAGGA 
AAAGTAGACA GAATGGCGCT GCTGGAGTCG GAAGCCGCCT CTTACCATGC GCCGGGCACC 
TGTACATTTT ACGGCACCGC CAACACCAAC CAGATGGTGG TGGAGTTTAT GGGAATGCAG 
TTGCCGGGTT CTTCGTTTGT GCATCCGGAT GCGCCGCTGC GCGAGGCATT GACTGCCGCT 
GCCGCACGTC AGGTAACACG TCTTACCGGC AACGGCAATA CGTGGATGCC GCTCGGTAAA 
ATGATCGACG AAAAAGTCGT GGTGAACGGC ATTGTCGCGC TGCTGGCTAC CGGCGGCTCC 
ACCAACCACA CCATGCATCT GGTTGCAATG GCGCGCGCGG CGGGCATTCT GATCAACTGG 
GATGACTTCT CGGATTTGTC GGAAGTGGTT CCGTTGATGG CGCGTCTGTA TCCGAACGGT 
CCGGCGGACA TTAACCACTT CCAGGCGGCG GGCGGCGTAC CGGTATTGAT GCGTGAGCTG 
CTCAATGCCG GATTGCTGCA CGAAGACGTT AATACTGTCG CAGGCTTCGG CCTGAAACGC 
TATACGCTGG AGCCCTGGCT CAACAACGGC GAGCTGGACT GGCGTGAAGG CGCGGAAAGG 
TCACTGGATA ACGATGTCAT TGCCTCTTTT GATAAGCCGT TCTCTCCTCA CGGCGGTACT 
AAGGTGCTAA GCGGTAATCT GGGGCGCGCA GTAATGAAGA CGTCTGCGGT ACCGGTTGAA 
AACCAGATCA TTGAAGCGCC TGCCATGGTA TTTGAAAGTC AGCATGATGT GCTGCCTGCG 
TTTGACGCGG GCCTGCTTGA CCGGGATTGT GTCGTTGTCG TGCGTCATCA GGGACCAAAA 
GCGAATGGAA TGCCAGAATT ACATAAACTC ATGCCGCCAC TTGGTGTATT ATTGGACCGC 
CGTTTCAAAA TCGCGTTAGT TACTGATGGA CGACTTTCAG GCGCTTCGGG TAAAGTGCCT 
TCAGCTATCC ACGTAACGCC GGAAGCCTAC GATGGCGGCT TACTGGCAAA AGTGCGCGAT 
GGCGACATCA TTCGCGTGAA TGGGCAGACA GGTGAGTTAA CTCTGCTGGT CGACGAGGCG 
GAACTTGCCG CTCGTCAGCC TCATATTCCG GACCTGAGCG CGTCGCGCGT CGGAACGGGG 
CGTGAGTTGT TTGGCGCGCT GCGCGAAAAG CTGTCGGGTG CGGAGCAGGG CGCAACCTGT 
ATCACTTTTT AA 

 

Protein sequence

MNPNLLRVTQ RIVERSQQTR KAYLARIEQA KTATVHRSQL ACGNLAHGFA ACQPEDKVSL 
KSMLRNNIAI ITSYNDMLSA HQPYEHYPQI IRQALHSVNA VGQVAGGVPA MCDGVTQGQD 
GMELSLLSRE VIAMSAAVGL SHNMFDGALF LGVCDKIVPG LAMAALSFGH LPAIFVPSGP 
MASGLPNKEK VRIRQLYAEG KVDRMALLES EAASYHAPGT CTFYGTANTN QMVVEFMGMQ 
LPGSSFVHPD APLREALTAA AARQVTRLTG NGNTWMPLGK MIDEKVVVNG IVALLATGGS 
TNHTMHLVAM ARAAGILINW DDFSDLSEVV PLMARLYPNG PADINHFQAA GGVPVLMREL 
LNAGLLHEDV NTVAGFGLKR YTLEPWLNNG ELDWREGAER SLDNDVIASF DKPFSPHGGT 
KVLSGNLGRA VMKTSAVPVE NQIIEAPAMV FESQHDVLPA FDAGLLDRDC VVVVRHQGPK 
ANGMPELHKL MPPLGVLLDR RFKIALVTDG RLSGASGKVP SAIHVTPEAY DGGLLAKVRD 
GDIIRVNGQT GELTLLVDEA ELAARQPHIP DLSASRVGTG RELFGALREK LSGAEQGATC 
ITF