Gene SeAg_B0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0689 
SymbolholA 
ID6793105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp682769 
End bp683800 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content58% 
IMG OID642774967 
ProductDNA polymerase III subunit delta 
Protein accessionYP_002145622 
Protein GI197249169 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00596065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGGT TGTATCCTGA ACAACTCCGC GCGCAGCTCA ACGAAGGGCT GCGTGCGGCA 
TATCTATTAT TGGGCAACGA TCCGCTGCTG CTGCAGGAAA GTCAGGACGC TATTCGTCTG 
GCGGCTGCGT CGCAAGGCTT CGAAGAGCAC CACGCTTTTA CTCTCGATCC CAGTACCGAC 
TGGGGATCGC TTTTCTCACT CTGCCAGGCG ATGAGCCTGT TCGCCAGCCG TCAAACGCTG 
GTGCTGCAAC TGCCGGAAAA CGGGCCTAAC GCGGCAATGA ATGAGCAACT CGCCACCCTG 
AGCGAGCTGC TGCATGACGA CCTGTTATTA ATAGTACGCG GAAACAAGCT CACCAAAGCG 
CAGGAGAACG CCGCCTGGTA TACCGCGCTG GCAGACCGTA GCGTTCAGGT CAGTTGTCAG 
ACGCCGGAGC AGGCGCAGCT TCCCCGCTGG GTGGCCGCCA GAGCGAAAGC ACAGAATTTG 
CAACTGGATG ACGCCGCGAA CCAACTGCTG TGCTATTGCT ATGAGGGCAA TCTGTTGGCG 
CTGGCACAGG CGCTGGAACG GCTGTCGCTG CTTTGGCCTG ACGGTAAGTT AACGCTTCCT 
CGCGTGGAGC AGGCCGTCAA TGACGCCGCC CACTTTACCC CTTTCCACTG GGTGGATGCG 
TTACTGATGG GGAAAAGCAA ACGCGCGCTG CATATCCTGC AACAGCTACG CCTTGAAGGC 
AGCGAACCGG TTATTCTGCT GCGCACCCTC CAGCGAGAGC TGCTGCTACT GGTAAATCTC 
AAACGTCAGT CCGCGCATAC GCCGTTACGC GCGCTGTTTG ATAAACACCG GGTCTGGCAA 
AACCGTCGCC CCATGATCGG CGACGCGTTG CAGCGTCTCC ATCCTGCGCA GCTTCGCCAG 
GCCGTGCAGT TACTGACGCG TACAGAAATT ACGCTCAAAC AGGATTATGG TCAGTCGGTA 
TGGGCAGATC TTGAAGGGCT GTCGCTCCTG CTCTGCCATA AGGCGCTGGC AGACGTATTT 
ATTGATGGGT GA
 
Protein sequence
MIRLYPEQLR AQLNEGLRAA YLLLGNDPLL LQESQDAIRL AAASQGFEEH HAFTLDPSTD 
WGSLFSLCQA MSLFASRQTL VLQLPENGPN AAMNEQLATL SELLHDDLLL IVRGNKLTKA 
QENAAWYTAL ADRSVQVSCQ TPEQAQLPRW VAARAKAQNL QLDDAANQLL CYCYEGNLLA 
LAQALERLSL LWPDGKLTLP RVEQAVNDAA HFTPFHWVDA LLMGKSKRAL HILQQLRLEG 
SEPVILLRTL QRELLLLVNL KRQSAHTPLR ALFDKHRVWQ NRRPMIGDAL QRLHPAQLRQ 
AVQLLTRTEI TLKQDYGQSV WADLEGLSLL LCHKALADVF IDG