Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0404 |
Symbol | prpD |
ID | 6795419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 402994 |
End bp | 404445 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642774693 |
Product | 2-methylcitrate dehydratase |
Protein accession | YP_002145349 |
Protein GI | 197250681 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACCC AAGAACTGAA CATCCGCCCG GAATTTGACC GCGAAATCGT CGATATCGTG GATTACGTGA TGAACTACGA CATCACCTCA AAGGTGGCGT ACGACACCGC GCATTATTGT CTGCTCGACA CGCTCGGTTG TGGTCTGGAA GCGCTGGAAT ACCCGGCCTG TAAAAAATTG CTTGGGCCGA TCGTGCCAGG CACGGTGGTG CCCAACGGCG CACGCGTGCC GGGCACCCAG TTTCAGCTCG ATCCGGTACA GGCAGCCTTT AACATTGGCG CGATGATCCG CTGGCTCGAT TTTAACGATA CCTGGCTTGC CGCCGAGTGG GGCCATCCTT CTGATAACCT GGGCGGTATT CTGGCGACGG CTGACTGGCT GTCACGCAAC GCCGTCGCCG CCGGCAAAGC GCCGCTGACC ATGAAACAGG TATTGAGCGG GATGATCAAA GCCCATGAAA TTCAGGGCTG TATCGCGCTG GAAAACGCCT TCAACCGTGT CGGGCTTGAC CATGTGCTGC TGGTGAAAGT GGCCTCGACC GCGGTTGTCG CTGAAATGCT GGGGCTGACG CGCGATGAGA TCCTCAACGC GGTATCGCTG GCGTGGGTGG ATGGGCAGTC GTTGCGCACT TATCGTCATG CGCCGAATAC CGGTACGCGC AAATCCTGGG CGGCGGGCGA TGCGACTTCG CGCGCGGTAC GTCTGGCGCT GATGGCGAAA ACCGGCGAGA TGGGCTATCC CTCGGCGCTC ACCGCCAAAA CCTGGGGCTT CTACGACGTT TCATTCAAAG GTGAAACGTT CCGTTTCCAG CGTCCTTATG GCTCCTACGT GATGGAAAAC GTGCTATTCA AAATTTCTTT CCCGGCAGAA TTCCACTCGC AAACCGCCGT CGAAGCGGCG ATGACGCTGT ATGAGCAGAT GCAGGCCGCG GGTAAAACGG CAGCGGATAT CGAGAAAGTG ACCATCCGTA CCCACGAAGC CTGTCTCCGC ATTATCGATA AAAAAGGCCC GCTCAATAAC CCGGCGGACC GCGATCACTG TATCCAGTAT ATGGTCGCCG TGCCGTTGCT GTTCGGACGG TTAACCGCGG CGGATTATGA AGACGAGGTG GCGCAGGACA AGCGTATTGA CGCCCTGCGC GAGAAAATCG TGTGTTATGA GGACCCGGCT TTTACCGCCG ACTATCACGA CCCGGAAAAA CGTGCTATCG GCAATGCGAT CACCGTGGAG TTTACTGATG GCTCACGCTT TGGCGAGGTT GTCGTGGAGT ATCCGATTGG TCATGCGCGT CGCCGCGCCG ACGGTATTCC GAAGCTTATC GAAAAATTTA AAATTAACCT GGCGCGTCAG TTCCCGACTC GCCAGCAGCA ACGCATTCTG GATGTCTCCC TGGACAGAGC CCGCCTGGAG CAGATGCCGG TTAACGAATA CCTCGATTTA TATGTCATCT GA
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Protein sequence | MSTQELNIRP EFDREIVDIV DYVMNYDITS KVAYDTAHYC LLDTLGCGLE ALEYPACKKL LGPIVPGTVV PNGARVPGTQ FQLDPVQAAF NIGAMIRWLD FNDTWLAAEW GHPSDNLGGI LATADWLSRN AVAAGKAPLT MKQVLSGMIK AHEIQGCIAL ENAFNRVGLD HVLLVKVAST AVVAEMLGLT RDEILNAVSL AWVDGQSLRT YRHAPNTGTR KSWAAGDATS RAVRLALMAK TGEMGYPSAL TAKTWGFYDV SFKGETFRFQ RPYGSYVMEN VLFKISFPAE FHSQTAVEAA MTLYEQMQAA GKTAADIEKV TIRTHEACLR IIDKKGPLNN PADRDHCIQY MVAVPLLFGR LTAADYEDEV AQDKRIDALR EKIVCYEDPA FTADYHDPEK RAIGNAITVE FTDGSRFGEV VVEYPIGHAR RRADGIPKLI EKFKINLARQ FPTRQQQRIL DVSLDRARLE QMPVNEYLDL YVI
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