| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3773 |
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| Symbol | |
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| ID | 4020335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4540987 |
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| End bp | 4541601 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957837 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_564769 |
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| Protein GI | 91795118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.2447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCTGG CGAATAATGT TGTTGTGCTC GACTTTGAAA CTACCGGTTT ATCCCCAGAC
ATGGGCGATC GCGCCATTGA AATTGGCGCG GTTAAGTTGG TTGATGGCCA AGTGGTAGAT
AGCTTTCAAG CACTGATAAA CCCGGGTCAA AGGGTAAACA GCTTTATTGA GCAATACACA
GGCATTAGTA ATCAAATGCT TAAAGATGCC CCAAGATCAA ACGTGGTGAT GGGGCAATTT
ACAGAGTTTA TTGCTGGATT TAATTTAGTG GCCCATAACG CCAGTTTCGA TAAGAAATTC
TTAGATGCCG AGTTTTCAGC CAATAAGCTC AGTTATAGCG GCCAATTTGC TTGTTCTCTA
TTGTTATCGC GGCGCATAAG CCAAGAGGCC CCCAATCATA AACTCGGCAC CTTGATCCAG
CACCATCAAT TAGCTAACGA CGGCGTATTT CACCGTGCCT TAGCCGATGC CACCATGACA
GCTAATCTAT GGTTACATCA AGTGTCTTTA CTGCAGCAAC GACTCCCTAC TCAGCAAATC
ACCTTAGATA TCATCAATAA AATATCCCGC TTGCCTAAGG CTAAAATAGC CAACTTCTTT
CAGACAATCA AATAG
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| Protein sequence | MTLANNVVVL DFETTGLSPD MGDRAIEIGA VKLVDGQVVD SFQALINPGQ RVNSFIEQYT
GISNQMLKDA PRSNVVMGQF TEFIAGFNLV AHNASFDKKF LDAEFSANKL SYSGQFACSL
LLSRRISQEA PNHKLGTLIQ HHQLANDGVF HRALADATMT ANLWLHQVSL LQQRLPTQQI
TLDIINKISR LPKAKIANFF QTIK
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