| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3770 |
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| Symbol | |
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| ID | 4020332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4537223 |
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| End bp | 4538131 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957834 |
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| Product | S6 modification enzyme RimK |
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| Protein accession | YP_564766 |
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| Protein GI | 91795115 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAG CCATACTCAC AACCAATCAG GCCGCGGATG ATAGCCGCTT AGTTGCCACG
GCTCGTAAAA AGGGACACAG TGCCAACCTA CTCGATTTGC GTCAGATGAG TATCGCACTA
AGGCCCAGTG TGGCGGATAT TTACTATCAG AATGAATTAA TCACGCATCA TTTTGACGCC
ATTATTCCAC GGCTCAATGT CTCCTATACG GATTATGGGA TTAATCTTCT GCAGCAATTT
ATCTGTTCCA ATACCTATGT CAGTGAGTCC CCTGAGGCTT TGCGCCTGGG TAGAGATAAA
CTTAAGTGTC TGCAGCATCT GCTCAGTAAA GGACTGCCTT TTCCAACCAC AGCCATCGCC
TATACGCCGG ATTTTTTTAA CGCCATTATG CAGCAGCTGC AATTGCCGCT GGTGGTTAAA
CTCATAGAAA GCACCGAAGG CACTGGGGTG TTTCTGGCAA GGACACACAA AGAAGTCGAC
AACTTATGCA AAACATTTTC TCTTGCGGGA GTGAGTTACC TTATCCAAGA GTTTATTGCA
GAAGCCGCCG GCCATGATGT TAGGGCATTT GTGGTGGGCA ACAGAGTGGT CGCCGCGATG
CAAAGGGATT CACAAGATGA TGATTTTAGG GCCAACGTAT CCTTAGGGGC GCATTCATCA
GCAGTCACGC TCAGTGCAGA TGAACAAGAA TTAGTGCTAA AAGCGACTCA AAGCATAGGG
GTTCATGTGG CAGGGGTGGA TTTTGTCCGC TCTAACCGAG GCCCCTTGTT GTTAGAAATC
AATGTTTCCC CCGACTTTAC TGGCGAGCAA GGCATAGAAG CAATCACCCT GCGCGATGTG
GCCGCCGACA TTATCGATTA TACCGTCCAG CATGCTGAGG CTTTTTATCA AGGGCGTAGC
AAATATTAG
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| Protein sequence | MKIAILTTNQ AADDSRLVAT ARKKGHSANL LDLRQMSIAL RPSVADIYYQ NELITHHFDA
IIPRLNVSYT DYGINLLQQF ICSNTYVSES PEALRLGRDK LKCLQHLLSK GLPFPTTAIA
YTPDFFNAIM QQLQLPLVVK LIESTEGTGV FLARTHKEVD NLCKTFSLAG VSYLIQEFIA
EAAGHDVRAF VVGNRVVAAM QRDSQDDDFR ANVSLGAHSS AVTLSADEQE LVLKATQSIG
VHVAGVDFVR SNRGPLLLEI NVSPDFTGEQ GIEAITLRDV AADIIDYTVQ HAEAFYQGRS
KY
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