| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3747 |
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| Symbol | |
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| ID | 4020309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4513203 |
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| End bp | 4514108 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957811 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_564743 |
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| Protein GI | 91795092 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATC TAAACGATTT CTATTATTTC GTAAAAACAG CAGAGTACGG CGGTTTTTCT
CCTGCGGGAC GAGCCTTAGG CATACCGAAA TCTAAACTCA GTCGCAGGAT TGCCTTGTTA
GAAGAAAGAC TCGGGGTGAA ATTAATCTAT CGCTCCACCC GTCAATTTAA AGTGACCGAC
ATTGGGCTCA AATTTTTAGA GCATTGCAAG GCGATGTTAA TCGAAGCTGA GGCTGCTGAA
GATGTGATTA AATCTATAAC ATCAGAGCCC AGTGGCACCA TTAAGCTAAC CTGTCCAATA
GCCTTACTCA ATGCCCATAT TCGTTATGTT CTTGCCGACT TCATGCTGAA ATATCCAAAT
ATAGTCATAC ACTTAGAGGC CAGCAATCGC AGGGTCGATC TTATCTCTGA AGGCGTGGAT
ATCGCCATTC GAGTGCGTCC ACCTCCGCTT GAAGATAGTG AATTGATTTT AAAAGTACTC
TCAGACAGGG GGCGGCGATT ATTAGCCAGC CCCTCTCTGG TCGATAAATA CGCTATGCCT
AGTAAACCCT GTGACTTAGC CGAATGGCCA AGCTTAGGCT TGGGAGAGCC CCAGTATCAA
CATAGCTGGA CGCTTTACGG GCCTGATGGC GACGCAATTA ATCTCAATCA CTCACCACGC
TATGTGACCA CTGACATGCT GGCGCTACGG GAAGCCGCAG TTAAAGGTGT TGGTGTGGTG
CTATTACCCT CTATCTTGGC TACTGAGCAA CTTAAAGATG GTTCTTTAAT TCATGTATTA
CCTGAATGGC TGCCAAAGCG GGAAATTATT CATCTGGTTT ATCCTTCCAG AAGAGGCATG
TTACCTTCGG TGCGGGCGCT GATTGATTTT CTATCTGAGT ATTATCGTTC TTTCGATGAG
GATTAG
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| Protein sequence | MKDLNDFYYF VKTAEYGGFS PAGRALGIPK SKLSRRIALL EERLGVKLIY RSTRQFKVTD
IGLKFLEHCK AMLIEAEAAE DVIKSITSEP SGTIKLTCPI ALLNAHIRYV LADFMLKYPN
IVIHLEASNR RVDLISEGVD IAIRVRPPPL EDSELILKVL SDRGRRLLAS PSLVDKYAMP
SKPCDLAEWP SLGLGEPQYQ HSWTLYGPDG DAINLNHSPR YVTTDMLALR EAAVKGVGVV
LLPSILATEQ LKDGSLIHVL PEWLPKREII HLVYPSRRGM LPSVRALIDF LSEYYRSFDE
D
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