Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3588 |
Symbol | |
ID | 4020145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4301503 |
End bp | 4302066 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637957649 |
Product | phage integrase |
Protein accession | YP_564586 |
Protein GI | 91794935 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATTCGG GGATAACAAG TCGCCTTTTA TCAGATTTGA AAACTTATGC CATTAGTGAG CGGCGAATGT GCCGACTTGA CAAACTTCTT AGCAAAATTG AGTTCCACAA AGGCATCAAT GACATAAAAA AATCCCACTC TGTTCATGTC TCAAAGGAAA AACTCGACGC CCTGACCACA GCCCAGCGAA ACGAACCCTT ATTTATTAGC CAACAAGGTA ATCCATACGA CCCAAACACG ATAGGCTCTC GCTTTGGAGA AGTTCGCCGC TCAATAATTA AGTCAGGAAT ACAATTTGAG CATAAGTTTC ATGATCTTAG ATGTAGTTAT GCAACCTACC GACTACATAG CCTACTTGAA GCAGGTATTG AGCCTGCGAA TGCACTGAGC TTACTGATGG GGTGGATGGG ACATAAGAAT GAATCCACGA CATGGAAGTA CTTGCAGTAC CTCAAAAGAA AAGAAGCGTT AAAAGAGAAG ATATCTGTAC TAGACAGCAT TATGCACCAA GCATTAGAGG AAGCTAATGA GCAAGACGTT GAAATTAATA GCCCCCTGGG TTGA
|
Protein sequence | MNSGITSRLL SDLKTYAISE RRMCRLDKLL SKIEFHKGIN DIKKSHSVHV SKEKLDALTT AQRNEPLFIS QQGNPYDPNT IGSRFGEVRR SIIKSGIQFE HKFHDLRCSY ATYRLHSLLE AGIEPANALS LLMGWMGHKN ESTTWKYLQY LKRKEALKEK ISVLDSIMHQ ALEEANEQDV EINSPLG
|
| |