| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3528 |
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| Symbol | |
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| ID | 4020082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4221140 |
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| End bp | 4221718 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957586 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_564526 |
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| Protein GI | 91794875 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAGCA TTTCCGATTC GGCTCAGGCC CATTTTGTAA AACTATTGGC TGATCAGCCT
GCTGGAACAC ACATTCGCGT GTTTGTTATC AGCCCAGGTA CCAGTCAGGC CGAGTGTGGC
GTATCTTATT GTCCTCCGGA TGCAGTTGAA AGCGATGATG TCGAGCTAGA GTTTAATGGC
TTTAATGCCA TGGTTGACGC GAAAAGTGTG GCTTACTTGG AAGACGCCAG CATTGATTTT
GTCACAGATC AGCTAGGCTC TCAGCTGACC CTTAAAGCGC CGAACGCAAA AATGCGTAAA
GTGTCTGGCG ACGCACCTTT GGTTGAGCGC ATCGAATACG TTATCCAATC TGAAATCAAC
CCACAGCTTG CCAGCCACGG CGGTAACATC ATGCTGGTGG AAGTGACTGA CGATGGCGTG
GCTGTATTGC AGTTTGGCGG CGGCTGTAAC GGTTGCTCGC AAGTGGATAT CACCCTTAAA
GATGGTATCG AAAAGCAGTT GCTGGACTTA TTCACCGGTG AACTCACAGG GGTTCGCGAC
GTGACAGATC ACCAGCCCGG CGCGCACTCT TATACTTAA
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| Protein sequence | MISISDSAQA HFVKLLADQP AGTHIRVFVI SPGTSQAECG VSYCPPDAVE SDDVELEFNG
FNAMVDAKSV AYLEDASIDF VTDQLGSQLT LKAPNAKMRK VSGDAPLVER IEYVIQSEIN
PQLASHGGNI MLVEVTDDGV AVLQFGGGCN GCSQVDITLK DGIEKQLLDL FTGELTGVRD
VTDHQPGAHS YT
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