| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3527 |
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| Symbol | |
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| ID | 4020081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4219735 |
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| End bp | 4221045 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957585 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_564525 |
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| Protein GI | 91794874 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATC TCAGTCGCCA CAAGCAGCTG TTAGCCCTTG CGCTGCCAAT GATTTTATCC
AATATCAGCA CGCCCTTGCT GGGTTTGGTG GATACCGCGG TAATCGGTCA TCTCTCTAAC
GCCTATTTCT TAGGGGGTGT CGCCCTTGGC GGCACCATTA TCAGCCTGAT GGTGTGGTTA
TTGGGATTTT TGCGCATGTC TACCACAGGA CTTGTGGCCC AAGCTGTTGG GGCGAACGAT
ATTAACAGCC AATATCGGTT GTTGATGCAA GGTGGGATAC TGGCGCTATT GCTGGGCATT
GGGGCCATGC TCATTCAAGC GCCGTTAACT GAATTGGCAC TCGAATTAAG CCAAGCCAGT
GCCGAGGTCA GCCACTACTG TCAGCAATAT ATTGCCATTC GTATTTACTC CATTCCCTTT
GCCCTGCTGA ATTTAGTACT GTTAGGTTGG CTACTGGGAA GACGCTCCCC CATGGCCGCC
ATGTGGCAAC TCATCATAGC CAACGCTGTT AATATCATAC TGGATATCAT TTTTGTGGTC
GGCCTTGGCT GGCAAGTGGA AGGCGCGGCT TGGGCTAGCG CGATTGCCGA TATTGCCGCC
TTCACTCTTG CCTGCAGCTT AGTTTATCGA CAGTTACTCA AGGAGCCAGA CTTCACCCCA
GCCAAGCTGT GGCAAGGCTT AAATCTGAGT GGTTTAACAC CATTGTTAAC CCTGAATCGG
GATATTTTCA TTCGCAGCTT ATGCCTGCAA GCCTGCTTTA GTTTTGTGAC TTTTTACGGT
GCCAGCCAGG GCGACATCAT ATTGGCTGCC AATGCCGTAC TGATGAATCT ATTAATGCTA
ATTTCCTACG CCCTCGATGG TATCGCCTAT TATGCCGAGG CTGAAGTGGG TAAAGCCTAT
GGTGAAAAAG ATAAACTTAA GCTCAAACAA GGAGTGAGCC TGGCCTTTTA CTGGTCGCTG
GCCATTGGAT TAGCGTTTAG CATCATTTTT TGGTTGTTCG GCGGCCATAT TATTAGCTTA
CTCACAGATA TCAGCCAAGT GAAAACCACT GCCGAGCAAT ACTTGCCTTG GCTTATTGCG
CTGCCTTTAT TGTCTTTTGC TTGTTATCTG TTCGATGGAG TTTATATTGG TGCGGCAAAG
GGGAAAGTGA TGCGTAACAG CATGATACTC GCAAGCTTCG GGGTGTTTTT TCCGCTGTGG
TTCATCACAC AAAGCTTAGG CAATCATGGC TTGTGGCTGG CGTTTAGCGC CTTTATGCTG
GCTCGCAGCT TGTTGCTGGG GCTAGATTAT CGGTTCAGCA AAGATTTTTA A
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| Protein sequence | MLDLSRHKQL LALALPMILS NISTPLLGLV DTAVIGHLSN AYFLGGVALG GTIISLMVWL
LGFLRMSTTG LVAQAVGAND INSQYRLLMQ GGILALLLGI GAMLIQAPLT ELALELSQAS
AEVSHYCQQY IAIRIYSIPF ALLNLVLLGW LLGRRSPMAA MWQLIIANAV NIILDIIFVV
GLGWQVEGAA WASAIADIAA FTLACSLVYR QLLKEPDFTP AKLWQGLNLS GLTPLLTLNR
DIFIRSLCLQ ACFSFVTFYG ASQGDIILAA NAVLMNLLML ISYALDGIAY YAEAEVGKAY
GEKDKLKLKQ GVSLAFYWSL AIGLAFSIIF WLFGGHIISL LTDISQVKTT AEQYLPWLIA
LPLLSFACYL FDGVYIGAAK GKVMRNSMIL ASFGVFFPLW FITQSLGNHG LWLAFSAFML
ARSLLLGLDY RFSKDF
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