| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3518 |
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| Symbol | |
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| ID | 4020072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4209709 |
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| End bp | 4211316 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957576 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_564516 |
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| Protein GI | 91794865 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTA TGACGCAAGA TACTGCGGCA CAAGATACTG CCGCCACTGA TGATCATCAC
CATGATGAAC GCCCGAGCGG TTTAATGCGC TGGGTGTTAA CCACCAACCA TAAAGACATA
GGAACCTTGT ACCTCTGGTT CAGTTTCATC ATGTTTTTAA CCGGTGGCGC CATGGCCATG
GTGATCCGCG CCGAATTATT TCAGCCTGGA TTACAATTAG TCGAACCTAA CTTCTTTAAC
CAGATGACCA CAGTGCACGG ACTCATCATG GTGTTTGGCG CCGTTATGCC AGCCTTTACC
GGGCTGGCCA ACTGGCTGAT CCCCATGATG ATAGGCGCGC CAGATATGGC ACTGCCTAGG
ATGAATAACT GGAGTTTCTG GATTTTACCC TTCGCGTTTT CCATGCTGTT GGGGTCATTA
TTCATGGAAG GCGGCGGGCC TAACTTCGGT TGGACCTTCT ACGCGCCACT TTCCACCACC
TATAGCCCAG ATACCACAGC CCTGTTTGTG TTCTCTGTGC ACATGATGGG CATAAGCTCA
ATCATGGGTG CGATTAACGT GATTGTGACT ATCGTCAACT TACGTGCACC TGGCATGACC
TGGATGAAAC TGCCACTATT CGTGTGGACT TGGTTAATCA CGGCATTCTT ACTGATAGCT
GTAATGCCAG TGCTTGCGGG CGCGGTCACC ATGGTATTAA CAGATAAATA CTTCGGCACT
AGCTTTTTCG ATGCCGCTGG CGGCGGCGAC CCTGTGATGT TCCAGCATAT TTTCTGGTTC
TTCGGTCACC CCGAAGTCTA CATCATGATT TTACCTTCCT TCGGTATCGT CTCGGCCATA
GTACCGACCT TTAGTCGTAA GAAACTCTTT GGTTACTCGT CCATGGTGTA TGCCACGGCC
AGTATCGCCA TCTTGTCATT CTTGGTGTGG GCACACCACA TGTTCACCAC AGGTATGCCG
GTATTTGCCG AGCTGTTTTT CATGTATTGC ACCATGTTAA TCGCCGTCCC CACTGGAGTT
AAGGTATTTA ACTGGGTGGC CACCATGTGG CGTGGCTCGA TCACCTTCGA GACTCCCATG
TTGTTTGCGG TGGCCTTTAT TATTCTGTTC ACCATTGGCG GTTTCTCTGG CTTGATGCTG
GCCATCACAC CAGCGGATTT CCAATATCAC GATACCTATT TCGTGGTGGC GCATTTCCAT
TACGTGCTGG TGACAGGGGC CATTTTCTCT ATCATGGCGG CGGCTTATTA CTGGCTGCCT
AAATGGACCG GCCACATGTA TGACGAAAAC TTAGGCCGCT GGCATTTCTG GTGTTCGGTG
ATTTCGGTCA ACGTCTTGTT CTTCCCTATG CATTTCTTAG GCTTAGCGGG CATGCCAAGA
CGTATCCCTG ATTACGCGGT GCAATTTGCC GACATCAATC AAATTGTCTC TATTGGTGGT
TTCGCCTTTG GTTTGTCACA GTTTATTTTC TTAGCCGTGG TAATTAAGTG CATCAAGGGC
GGCGAAAAAG CAGCAGACAA GCCATGGGAA GGAGCGGAAG GCTTAGAGTG GACCATTCCA
AGTCCTGCGC CTTATCACTC ATTCACCACA CCACCTGAGG TGAAATGA
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| Protein sequence | MSTMTQDTAA QDTAATDDHH HDERPSGLMR WVLTTNHKDI GTLYLWFSFI MFLTGGAMAM
VIRAELFQPG LQLVEPNFFN QMTTVHGLIM VFGAVMPAFT GLANWLIPMM IGAPDMALPR
MNNWSFWILP FAFSMLLGSL FMEGGGPNFG WTFYAPLSTT YSPDTTALFV FSVHMMGISS
IMGAINVIVT IVNLRAPGMT WMKLPLFVWT WLITAFLLIA VMPVLAGAVT MVLTDKYFGT
SFFDAAGGGD PVMFQHIFWF FGHPEVYIMI LPSFGIVSAI VPTFSRKKLF GYSSMVYATA
SIAILSFLVW AHHMFTTGMP VFAELFFMYC TMLIAVPTGV KVFNWVATMW RGSITFETPM
LFAVAFIILF TIGGFSGLML AITPADFQYH DTYFVVAHFH YVLVTGAIFS IMAAAYYWLP
KWTGHMYDEN LGRWHFWCSV ISVNVLFFPM HFLGLAGMPR RIPDYAVQFA DINQIVSIGG
FAFGLSQFIF LAVVIKCIKG GEKAADKPWE GAEGLEWTIP SPAPYHSFTT PPEVK
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