Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3501 |
Symbol | |
ID | 4020055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4188974 |
End bp | 4189798 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957559 |
Product | hypothetical protein |
Protein accession | YP_564499 |
Protein GI | 91794848 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000151947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCCAG CAGAATTGCT GAAAAAAATT CATCAGTTAC CACGATTGCC CAAAGCCGTG AGTGAGCTAT TAGAAGCGGT GAACAATGAT CAAATTAGCA TCAAAGACAT AGCCGCTAAG GTGTCGCAAG ATCCTCTGAT GAGCGCGAGA GTGTTGAGGC TGGCGAACTC CTCCTATTTT GGTGCTAATC GCAAGGTGGC TAGCATAGAT GCGGCAGTGG TTCGCTTAGG CATGCAAACC TTGAGAAATT TAGTCATAGC CTCAGCTGTG GTTGGGGCTG TGCCTAAAGC AGAAGGTGTC GACTTAGGCG GTTTTTGGGG GGCCACTTTT GAAGTGGCGC TCTATAGTCA AGAGTTGGCC AAGCATACCC ATATCCCGCC AGAAGAGGCC TTTACTTGTG GGATTTTACA CAATATCGGC GACCTATTTA TCGCAACGGC TGCGCCGGAT GCCGCTAAAG CCATAGATAA AGCGGTTATG GCAGGTGCCG ATAAGCAAGA AACCGAACTA AAAATACTGG ATTTCGATGC TGCCACCATA GGTGCGCTGC TCGCTCAATC ATGGCGCTTT ACTGATAAGC TAGCCGCAGG TATTGCCAAT CAGTATCAAC CTAAAGAAGC CGAGCTGTAT TCAGATTTAG CTGGGCTTAT GTACATGGCT AAGGCGTTGT TTAGCGGTTG GGATGAAATT GAAGATGATG CCATCACAGG TTGGCTTTCT GTGCAGGCCA TGAATGCCGG ACTTGAAATG GATATGTCCG ATCTCGCGGC TGACTTATTA AAAGTGAAAG GCAGTGGTTT GGAAATGGGC CAATTACTGG CTTAA
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Protein sequence | MEPAELLKKI HQLPRLPKAV SELLEAVNND QISIKDIAAK VSQDPLMSAR VLRLANSSYF GANRKVASID AAVVRLGMQT LRNLVIASAV VGAVPKAEGV DLGGFWGATF EVALYSQELA KHTHIPPEEA FTCGILHNIG DLFIATAAPD AAKAIDKAVM AGADKQETEL KILDFDAATI GALLAQSWRF TDKLAAGIAN QYQPKEAELY SDLAGLMYMA KALFSGWDEI EDDAITGWLS VQAMNAGLEM DMSDLAADLL KVKGSGLEMG QLLA
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