Gene Sden_3488 details

Gene Information

• Locus tag: Sden_3488
• ID: 4020042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 4176396
• End bp: 4177181
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637957546
• Product: hypothetical protein
• Protein accession: YP_564486
• Protein GI: 91794835

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.609934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAAC ATAATTTAAG TAAATATACA TCGATTGTTT TGCTATGTTT TATTTCTGCT 
TGCAATGCTA GTTCTCATCA GCTTGAACGC AGTGAAAGTA ACTATAGTGA AACCGTTTCA 
AATAAAGTGC TTATACACAT GGATATAGAA ACCATGTTTG CTAATTCTCA ATTAAGATCA 
TTAGCATATG CCGCAGGCAA AGGTAAAATG AGTCAAATTG ATAAGTTATT GGAACAGGGC 
GTCGACGTTA ACGCTAAAGG TACTAATAAT GCTACAGTTT TGTTCTGGTC AATGAGAAAT 
AAAAAGGGAT TTGAATACCT ATTGAAGCAA GGTGCAAATC CAAATGTTGT TTTTGGAGAT 
GGCGGCTCCG TAATGCATTG GGTAGCTAGG AAGCGAGATT GTAGTATGTT GATGTCCGCT 
TTACAACACG GAGGAAACCC TAACTTAAAA GCTGGTATGT TTGGTGGTTC ACCTGCCTTT 
GAAACAATTA CAGCGGGGAA AAATGATGGT GTTCCTAATT GTCTTAAGTT GTTGCTATCA 
AAAGACGCCG ATATTGACTT TCAAGATGAA CAGGGGCAGT CGGTTTTACT TGCTGCAGCA 
GATCTAGCTA GATTTGATAT CACACTTTAT CTTTTAAAAA GTGGTGCAAA TTCCAAACTG 
ATGGACAACA AGCAAAGAAC AGTTAGAGAC CTTGTTAATT CGTATAAAGG CGCATTTATA 
AAAGGCAGCG TAACAGAGGA ATATTGGTTG AAAGTTGATG CCTGGCTGTT GAATTCTGGA 
GAATAA 

 

Protein sequence

MIQHNLSKYT SIVLLCFISA CNASSHQLER SESNYSETVS NKVLIHMDIE TMFANSQLRS 
LAYAAGKGKM SQIDKLLEQG VDVNAKGTNN ATVLFWSMRN KKGFEYLLKQ GANPNVVFGD 
GGSVMHWVAR KRDCSMLMSA LQHGGNPNLK AGMFGGSPAF ETITAGKNDG VPNCLKLLLS 
KDADIDFQDE QGQSVLLAAA DLARFDITLY LLKSGANSKL MDNKQRTVRD LVNSYKGAFI 
KGSVTEEYWL KVDAWLLNSG E