Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3404 |
Symbol | |
ID | 4019952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4059468 |
End bp | 4059893 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957456 |
Product | transposase |
Protein accession | YP_564402 |
Protein GI | 91794751 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA GCACTATTTC GATTGATTTG GCAAAAAATG TATTTCAATT ATTGGGGATG GATGAACACG CCAAACAAGT GTTCAGCAAG CGCTTAAATC GCGCACAGCT GAGCGAGTTC ATGTCGCAGC AGCCAGTCTG CGATGTGGTC TTTGAGGCCT GTTATTCCTC CCATTATTGG GGGCGTAAGT TTCTTGCCAT GGGGCACAGA GTTAAGCTTA TCCCCGCCCA ACATGTCACG CCCTTTGTGC GCGGCAGCAA GAACGATAAA AATGATGCCA TGGCGATTTA TGAAGCCAGC TTCAGGCCCA GCATTCGCTT CGTGCCGATT AAAACTGAAG CCCAGCAAGA GATACTCATA ATGACTTCAT TGATCTCACG ATGCAAATTA TTCCCCTCGA ACGTCCCAAT GGGGAGGGGC CCGTGA
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Protein sequence | MKVSTISIDL AKNVFQLLGM DEHAKQVFSK RLNRAQLSEF MSQQPVCDVV FEACYSSHYW GRKFLAMGHR VKLIPAQHVT PFVRGSKNDK NDAMAIYEAS FRPSIRFVPI KTEAQQEILI MTSLISRCKL FPSNVPMGRG P
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