Gene Sden_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3404 
Symbol 
ID4019952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4059468 
End bp4059893 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content48% 
IMG OID637957456 
Producttransposase 
Protein accessionYP_564402 
Protein GI91794751 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA GCACTATTTC GATTGATTTG GCAAAAAATG TATTTCAATT ATTGGGGATG 
GATGAACACG CCAAACAAGT GTTCAGCAAG CGCTTAAATC GCGCACAGCT GAGCGAGTTC
ATGTCGCAGC AGCCAGTCTG CGATGTGGTC TTTGAGGCCT GTTATTCCTC CCATTATTGG
GGGCGTAAGT TTCTTGCCAT GGGGCACAGA GTTAAGCTTA TCCCCGCCCA ACATGTCACG
CCCTTTGTGC GCGGCAGCAA GAACGATAAA AATGATGCCA TGGCGATTTA TGAAGCCAGC
TTCAGGCCCA GCATTCGCTT CGTGCCGATT AAAACTGAAG CCCAGCAAGA GATACTCATA
ATGACTTCAT TGATCTCACG ATGCAAATTA TTCCCCTCGA ACGTCCCAAT GGGGAGGGGC
CCGTGA
 
Protein sequence
MKVSTISIDL AKNVFQLLGM DEHAKQVFSK RLNRAQLSEF MSQQPVCDVV FEACYSSHYW 
GRKFLAMGHR VKLIPAQHVT PFVRGSKNDK NDAMAIYEAS FRPSIRFVPI KTEAQQEILI
MTSLISRCKL FPSNVPMGRG P