| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3398 |
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| Symbol | |
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| ID | 4019946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4053322 |
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| End bp | 4054650 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957451 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_564397 |
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| Protein GI | 91794746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGATC CCTTAATCAA TGCCAATCCC GCCGGCCAGC CTCAAGCCAA TAGCTATTGG
GCCAGCACTA TTGAGCTCCC AGCCCTATTG CCCTCATTAA CTGGCACTCA GCGCACCCAA
GTGGCTATCA TAGGCGGCGG TTACACTGGG CTGATGACAG CCTATTACCT TGCCAGTGAA
TTCAATATCG ATTGTCATGT ACTCGAAGCC AACCGTGTAG GCTTTGGTGC CAGCGCCCGC
AATGCAGGTT TTGTGCTCAA AGGATCAGGC CGCTTAGGCT ATGCCGATAT GGCGAAGCGC
TGGGATTTAG CTACCGCTAA GGGGATTTAT CAAGAATTCA GCGAAGCTGT ATCTCGAGTC
GATGGCCTCA TCAAGCAGCA TAGTATTGAC TGCGAGCCTC AAGAACAGGG TTATTTAAAA
GTGGCTCACA ATGCCAAGGC CATGGAAAAA CTCAAAGGCG CCAGTGAATT TATTCTCAAA
CATTTTGGCG ATGGCGCCGA GTTTATCTCG GGGCAAGATT TCTGCGAGCG TTACATGAAC
CACGGCCAAG CCTTCGGCGC CCTGCGCTTA AAAGATGGCT TTGGCTTAAA CCCACTCAAG
CTACTCTTAG GCTATAAAGA TGCCGTGCTT AGTCAAGGTG TCACCATAAG CGAGCAATCC
TGCGTGCTCG ATTGGATAGA AGAAAACGGT CAACACAGGC TGATAACTGA CAAGGGTGAA
TTGATTGCCG ACCAAGTGAT TTGCGCCGGC AATGCCTATA CCCCAAAGCA CTTTAACCCG
CGTATAGACA ATAAGTTCCT GCCCATCTTA AGCAATGTGA TAGTCACTGA ACCCCTGTCA
GCGGATGAAC TCATCAGCGC CGGACTTAAG ACCCATCAAG TCACCATGGA TACCCGCATC
CTTAAATATT ATTACCGTTT GCTGCCGGAC AATCGCATCC TGTTTGGTGG CCGCGGCGCC
GTATGGGGCA AAGATGGCGC CAACCCTATT TATGGCCAGC GGCTAAAACA GGCATTGGAT
AAGTGTTTCC CAACACTCAA ACACAAGGCT GTCGCCTACA ACTGGACCGG CTGGATCGCA
GCGGCCATGG ATGATATGCC CCATGTTTAT GGTAAAGATG GTGTGGGGTA CAGCTTAGGC
TATTGCGGCG CTGGAGTGTC TTTTAGCGCC CAAGCAGGCT TTCGCCTCGC CCAAATGATG
GCAGGAAAAA CTGCACCAGC CCTACCGCTT TATCAAGCAC CTCTGCCCGT AATGCCCTTC
GCTCAGGCCA GACGCTTAGG CCAATGGGGT TATTACCATT ACGGCTGGCT TAAAGACAAA
CTCGGCTAA
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| Protein sequence | MYDPLINANP AGQPQANSYW ASTIELPALL PSLTGTQRTQ VAIIGGGYTG LMTAYYLASE
FNIDCHVLEA NRVGFGASAR NAGFVLKGSG RLGYADMAKR WDLATAKGIY QEFSEAVSRV
DGLIKQHSID CEPQEQGYLK VAHNAKAMEK LKGASEFILK HFGDGAEFIS GQDFCERYMN
HGQAFGALRL KDGFGLNPLK LLLGYKDAVL SQGVTISEQS CVLDWIEENG QHRLITDKGE
LIADQVICAG NAYTPKHFNP RIDNKFLPIL SNVIVTEPLS ADELISAGLK THQVTMDTRI
LKYYYRLLPD NRILFGGRGA VWGKDGANPI YGQRLKQALD KCFPTLKHKA VAYNWTGWIA
AAMDDMPHVY GKDGVGYSLG YCGAGVSFSA QAGFRLAQMM AGKTAPALPL YQAPLPVMPF
AQARRLGQWG YYHYGWLKDK LG
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