Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3354 |
Symbol | rpmE |
ID | 4019902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3997359 |
End bp | 3997571 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957407 |
Product | 50S ribosomal protein L31 |
Protein accession | YP_564353 |
Protein GI | 91794702 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG GTATTCACCC AACGTACGCA GAAATCACCG CAACTTGTAC TTGTGGCAAC ATCATCAAAG TAAATTCAAC TGCTGGTAAG AGCTTGCATT TGGACGTATG TGGTGCATGT CACCCATTCT ACACTGGTAC TCAGAAAGTT GTTGACACTG GTGGTCGTAT CGACAAGTTC AACAAGCGTT TCGGTATACT TGGCAAGAAG TAA
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Protein sequence | MKPGIHPTYA EITATCTCGN IIKVNSTAGK SLHLDVCGAC HPFYTGTQKV VDTGGRIDKF NKRFGILGKK
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