| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3345 |
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| Symbol | |
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| ID | 4019893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3987135 |
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| End bp | 3988394 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957398 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_564344 |
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| Protein GI | 91794693 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.138271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTA TCAATCAAGT GCTGCAAGAT TTAGATAAGC GTCAGCCAGC GTCAATCGCC
ATCGATAAGC CAGAGGGGGC TGATTTTGTT CGACCCGAAC TGCAATTTAA GTCCCAACAA
TCGTTCAAAA ACAAGCCCAG CAAGGTAGCG CTTACTTTAG TGAGCTTAGT GGTCAGCTTG
GCTATGGTGG CGGGTGTGTG GCAGCTGTAT CAAAACCAAG GTTTTCAAGA CCAAGGAACT
CAAGGCCAAG ACCCCCAACA ATTGTCTCAA CCAGTAATCA GCGCCGCCAA TATGGTTGTG
GCTGAACCCG CCAAGGATGT GGTCAATCAA GAGGTGGCCG TAGCAATGAT TGCTGCTGAA
GGCAGTGTTG AGCAGCAGAT TGACATGCGC ACCGACTCAA AGCCCGCGCT TGCTAAAATT
GTGCTCAAGC AGTCGCAAAC TATCACGCCA GAGCCAATCA CACCTGAACC AATAGCATCA
GTGTCAAAAG CGTCCAAACC CATCACACCA GAGCCAATAG CAGTAGAACC TATGACGCAC
AAGCTCATAC CTCAGCAGTC CGCATCACTT GCAGTGGCCG GTGACAGTGC TGCGGTTCCA
GTTGTTTCTG ATGCTGATGC CGAGCTTGAT GCAGTACCGC CAGCTCAAGG TAACATGGCA
GTAACCGAAG TGGTGCTCAC GCTCCAGCAA AGGGCAAATA AGCTGATGAT AAAGGCCGAG
ACTGCTGAAA ACAAGGGGCG TTTTGCCGAG GCGAAACGGG ATTATTTACA AGTATTAGCC
TTGGTTCCCG AACAAACTGA GGCCCGTAAG AAGCTGCTTG GTTTGTATTA TGCCCAAGGA
GAGCTCAGTC AGGCGATGGC GTTAGTGGAG CAAGCTATCA GCAGCAATCC CGAGCCTTGG
CAATGGCTGT TACTTAAAGC CAAATTGCAA CAGGGCGGTG GCGCTCTATC AATGGCCTTA
GCGACCTTAG ATACCATTCC AGATCAAGGA ATATGGGCCA AAGACAAGTG GGCAGCGCAA
GGTGATATTG CCCAGAAGCT AGGTGAGTTT GCTATTGCAG CGAAAGCTTT TACTGCACTC
ACCTTAGTGG ACGCAGATAA AGGGTTATGG TGGATGGGGC TTGCCTATGC ACAGGATTCG
CAGCAGCAAT ACTCTCTCGC ACGCCAATCC TACCTCACGG CTATGCAGCG GGCAGGATTA
TCATCATCGG CTAGAACATT TATCGAAAAC AGATTGAAAG AATTAGGAGA GCGTCGATGA
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| Protein sequence | MSLINQVLQD LDKRQPASIA IDKPEGADFV RPELQFKSQQ SFKNKPSKVA LTLVSLVVSL
AMVAGVWQLY QNQGFQDQGT QGQDPQQLSQ PVISAANMVV AEPAKDVVNQ EVAVAMIAAE
GSVEQQIDMR TDSKPALAKI VLKQSQTITP EPITPEPIAS VSKASKPITP EPIAVEPMTH
KLIPQQSASL AVAGDSAAVP VVSDADAELD AVPPAQGNMA VTEVVLTLQQ RANKLMIKAE
TAENKGRFAE AKRDYLQVLA LVPEQTEARK KLLGLYYAQG ELSQAMALVE QAISSNPEPW
QWLLLKAKLQ QGGGALSMAL ATLDTIPDQG IWAKDKWAAQ GDIAQKLGEF AIAAKAFTAL
TLVDADKGLW WMGLAYAQDS QQQYSLARQS YLTAMQRAGL SSSARTFIEN RLKELGERR
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