| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3275 |
|---|
| Symbol | |
|---|
| ID | 4019823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3905941 |
|---|
| End bp | 3906264 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637957328 |
|---|
| Product | GP46 |
|---|
| Protein accession | YP_564274 |
|---|
| Protein GI | 91794623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000845593 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC AACCTGAAAC AGTGACCCGT GACCAGCACG GTTTTTGGAC CCACTCACAA
CTACCCTATT GGGATGAAGG CACCACATGG GCTGATGCCA CCAAGTGGTT TACCGCCCAG
AACCTTGCAC TGCATTTAGA CCAGTTTGAA GATTCTGCAC CAGAAGAACT CCAAGATGCC
TGGTTCGAAC AAGGTGAGTG TAATTGCAGC CAGTGGCAAC CCAGTTGCCA TGCACACGGT
GCCTTCTTGA TATCTATCCA CGACACCGAA GATGGCCCCA TCGCCATGTT TGCCGCCCCA
ATCACCACGG ACAAAGCGCT ATGA
|
|---|
| Protein sequence | MNIQPETVTR DQHGFWTHSQ LPYWDEGTTW ADATKWFTAQ NLALHLDQFE DSAPEELQDA
WFEQGECNCS QWQPSCHAHG AFLISIHDTE DGPIAMFAAP ITTDKAL
|
|---|
| |