| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3067 |
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| Symbol | |
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| ID | 4019593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3684281 |
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| End bp | 3685624 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957119 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_564068 |
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| Protein GI | 91794417 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCATCAC CTAATATAGA TATTGAATTG GATGCCCTAA AAGAAGCAGT TTCAGTGGCT
TTGGCTCATG CTAAAAAATT AGGCTCGAGC GCCGCAGAAG TGGCCATCAG CAAACAGCAG
GGGTTATCTG TTTCAACTCG TACACAAGAA GTTGAAACCG TTGAGTTTAA TAAAGATGGC
GCCCTAGGGA TCACAGTTTA TCGTGGTGGT TGTAAAGGCA GTTCTTCCAC CTCAGATCTG
AGCACAGATG CCATTGCCCT AGCGGTAAAA GCGGCGGATG ATATCGCTCG TTATACTTCA
GAAGATCCCT TTAGCGGTCT TGCTGATAGT GCGCTAATGG CTAAAAATAT TCGCGATTTA
CAGCTTTATT ATCCTCAAGA TATTGGTGCA GAAGAACTGG CTGACTTGGC TATTAGGGCT
GAAAAAGCAG GTGTTGATGC CGATACTCGT ATTAAATATT CAGATGGTGC CACAGCCAAT
GCTCATACCT CAGCCAAGGT TTATGCCAAT AGTCATGGTT TTTTACAAGG GTATTGCAGC
TCGCGTTATA GTTTAAGCAG TGTGGTCATT GGCGAAGAGT CAGACGGCAA TATGCAGCGG
GATTATGACT ATACGGTATC CCGTAAATTT GCTGACTTAC TGAGTCCTGA AGAAGTGGGA
GCTAAAGCCG CTGAAAAGAC GCTGAGCCGC TTAGATGCAC GCAAAATAGC CACGGCTAAA
TTGCCTGTGT TATTTGCCCC GGAGATAGCC ACAGGTTTAA TAGGGCATCT AATTGGTGCC
ATCAGTGGCG GCAGTTTATA TCGTAAGTCG AGTTTTTTAT TAGACTCATT ACACACTCAC
ATTTTTCCTG ATTGGTTTAG CATTGAAGAG CAGCCCCATA TACTGTCAGG GTTGGCAAGT
GCTAACTATG ATAGCGAAGG GGTGGCCACT CAAGACAGGC GCATTATAGA CAGGGGACAA
TTAGAGACCT ATTTACTCAC CAGTTATTCT GCCAGAAAGC TAGGAATGAC AAATACCGGT
CATGCCGGCG GGATTTATAA CTGGACCTTA AGCCACAGCA ATCAAACCTT TGCGGATTTG
ATAAAGGCGA TGAATACCGG CTTGATCGTT ACCGAAGTCA TGGGCCAAGG CGTAAATGGC
GTGACGGGTG ATTATTCTCG CGGTGCGGCA GGCTTTTACG TGGAGAATGG CGTTATCCAA
TACCCAGTAG AAGAAATCAC CATAGCGGGA AATCTAAAAG ACATGTTTAT AGGCATTCAA
GGGGTGGCCA TGGACAGAGA CCTGCGCTCA TCCATCCGCA CAGGCGGTAT CTTACTCAGC
GAGATGAAGA TAGCCGGTAA CTAA
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| Protein sequence | MSSPNIDIEL DALKEAVSVA LAHAKKLGSS AAEVAISKQQ GLSVSTRTQE VETVEFNKDG
ALGITVYRGG CKGSSSTSDL STDAIALAVK AADDIARYTS EDPFSGLADS ALMAKNIRDL
QLYYPQDIGA EELADLAIRA EKAGVDADTR IKYSDGATAN AHTSAKVYAN SHGFLQGYCS
SRYSLSSVVI GEESDGNMQR DYDYTVSRKF ADLLSPEEVG AKAAEKTLSR LDARKIATAK
LPVLFAPEIA TGLIGHLIGA ISGGSLYRKS SFLLDSLHTH IFPDWFSIEE QPHILSGLAS
ANYDSEGVAT QDRRIIDRGQ LETYLLTSYS ARKLGMTNTG HAGGIYNWTL SHSNQTFADL
IKAMNTGLIV TEVMGQGVNG VTGDYSRGAA GFYVENGVIQ YPVEEITIAG NLKDMFIGIQ
GVAMDRDLRS SIRTGGILLS EMKIAGN
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