Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3007 |
Symbol | |
ID | 4019532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3610204 |
End bp | 3611757 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957058 |
Product | hypothetical protein |
Protein accession | YP_564008 |
Protein GI | 91794357 |
COG category | [R] General function prediction only |
COG ID | [COG3497] Phage tail sheath protein FI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGTGA TGAAAACACC TGGTGTGTAC ATAGTTGAGA AGAATGCATT TCCGAATTCG GTGGTCGAAG TAGCAACCGC CGTACCCGCC TTCATAGGTT TTACACAGAA GGCCATTAAT GGCAATAAAT CACTACTCAA TAAACCCTGG CGAATTACCT CGATGGCGGA ATTTCGCCGT TACTATGGTG AGGCACCTGA GCCTGAGTTT GAGATAGCTG AAAAGCCTGC CGACTCCTTA GAGGATGCGG CAATTGTAAT GGGGGATAAA TCCTATGTGA TCTCTCAATC CAATACCAAA TACTTACTCT ATTACAGCAT GATGTTGTTT TTCCAAAATG GCGGTGGCCC TTGCTATATC GTCTCAGTGG GAAATTATAC TAACGATGTT GAAGCGGCAA AATTACTGGC AGGCATCCCC ACGCTACTGA AAGAGCAGGA ACCCACTATG CTGGCAATTC CTGAGGCTAT TTTGCTCGCC GAGGATGACT GCATCAGTGT TCAGCAAGCA TCCTTAGCCC ATTGTGGCGG GGTAATGCGC AATCGCGTGG CGATTCTAGA TGTGTGGAAC GGCCATCTGG ATAGGCAAGA CCCAAGCGGT GATTGCATCG AGAGTTTTAG ATCTAAACTT GGCATCAACT ATCTGGATTT CTCCTCGGCC TACTACCCTT GGCTACACAC CACCATAGTG CAGGACAGCG ATCTGAGTTT TAAAAATATC GCGAATACCG ATGTGCTCAT TGGGCTGTTA AAAGAGGAAG TGACGGCAAG TTTTACCGAT CTCGACGGCT TGACTGATGA TCAGTTAGCC AGCCCAAGTA ATAAACTCAG GGTGGCCAAA CGTGATCAGA TGTTGACCGA GGTCGACAGT CTAGCAACTG TGGCTGGGGA CGCTCAAATT GTGCTGTTGA ATAAAACCTT AAGCTCCATG AGCCCATTGT ACATGAGCAT TTTATTGGAC ATTAAGGGCA AGCTTAATTT ATTGCCTCCC TCAGCCTGCA TGGCTGGGAT TTATACCATG GTGGATAACG CCCGTGGTGT GTGGAAGGCA CCGGCTAATG TCAGTCTCAA TGCCGTGGTT TCTCCTGCGG TGAATATCTC CCACGATGAA CAAGAAGATC TTAACGTTAC CACCCAAGGT AAGTCCATCA ATGCTATCCG CACCTTTATC GGCGAAGGCA CCTTAGTTTG GGGCGCCAGA ACCTTAGACG GTAATAGCCT GGATTGGCGT TATATCAGTG TGCGCAGAAC CATGATCATG CTGGAAGAGT CGATTCGTCT TGCGGCGAAA GCTTATGTGT TTGAACCCAA TACCGCCAAT ACCTGGACCA CACTTAACAG CATGATAACC AACTTCTTAA CCGGAATTTG GAAGCGGGGT GGCTTGGCTG GTTCAGTGCC TGCAGATGCC TTCAGTGTCA GTGTTGGCCT TGGCAGCACT ATGACAAGTG AAGATATTCT CGAGGGCATT TTACGCATCA CAGTGCTAGT GGCTGTGACC CGCCCAGCAG AGTTTATTGA GATCACCTTC CAGCAGCAGA TGCAAAAATC TTAA
|
Protein sequence | MGVMKTPGVY IVEKNAFPNS VVEVATAVPA FIGFTQKAIN GNKSLLNKPW RITSMAEFRR YYGEAPEPEF EIAEKPADSL EDAAIVMGDK SYVISQSNTK YLLYYSMMLF FQNGGGPCYI VSVGNYTNDV EAAKLLAGIP TLLKEQEPTM LAIPEAILLA EDDCISVQQA SLAHCGGVMR NRVAILDVWN GHLDRQDPSG DCIESFRSKL GINYLDFSSA YYPWLHTTIV QDSDLSFKNI ANTDVLIGLL KEEVTASFTD LDGLTDDQLA SPSNKLRVAK RDQMLTEVDS LATVAGDAQI VLLNKTLSSM SPLYMSILLD IKGKLNLLPP SACMAGIYTM VDNARGVWKA PANVSLNAVV SPAVNISHDE QEDLNVTTQG KSINAIRTFI GEGTLVWGAR TLDGNSLDWR YISVRRTMIM LEESIRLAAK AYVFEPNTAN TWTTLNSMIT NFLTGIWKRG GLAGSVPADA FSVSVGLGST MTSEDILEGI LRITVLVAVT RPAEFIEITF QQQMQKS
|
| |