Gene Sden_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3006 
Symbol 
ID4019531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3609678 
End bp3610151 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637957057 
Producthypothetical protein 
Protein accessionYP_564007 
Protein GI91794356 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATG ATGGTTCAAA ACAGTCAGCT AATGTATGGC CAATGGCGAA GTTTTATTTC 
GAAGTGAAAT GGGCCGGCGG TGCGGGTGAA GGCATGGTGT CATCTTTTCA AGAAGTATCA
GGATTAGATG TTGAGGCTCA GGTCATCGAA TACCGCGCAG GAGATAACAA GATTTTCTCC
ACCATAAAAA TGCCGGGAAT AGTGAAAACC AGCAACGTCA CCTTGAAGAA GGGTATTTTT
GCCAAAGACA ACAAGTTTTA TGACTGGTAC AGCAAGATCA AGCTCAATAC TGTGGCCCGT
ACTGCAGTGA CCATAAGTCT GCTAGATGAG ACAGGGTCAC CCACCATGGT ATGGACCCTA
GCGAATGCTT GGCCCACGAA AGTGACAGGA ACAGATCTTA AGTCCGACGG TAACGAAGTT
GCAGTTGAAA CCATAGAGCT GGCCCACGAA GGTTTGGCCA TAGTGAATAA GTAA
 
Protein sequence
MSDDGSKQSA NVWPMAKFYF EVKWAGGAGE GMVSSFQEVS GLDVEAQVIE YRAGDNKIFS 
TIKMPGIVKT SNVTLKKGIF AKDNKFYDWY SKIKLNTVAR TAVTISLLDE TGSPTMVWTL
ANAWPTKVTG TDLKSDGNEV AVETIELAHE GLAIVNK