Gene Sden_2844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2844 
Symbol 
ID4019364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3393672 
End bp3394427 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content46% 
IMG OID637956891 
ProductThiJ/PfpI 
Protein accessionYP_563846 
Protein GI91794195 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT TAATCATCTT CTTGAGCATC TTATTCGCGG TCGTCCTTAG TCCAGTGCAG 
GCGGGGGAGG CTAAAAAAAT TCTTATTGTC GCTTCGAATA TGCAAGATAT GGGGGATCCA
GAGCAGCATG ACGCTAGAAA TAACCTTTGG GAATATGCAC CGCCTTACCA TATCTTCGTT
TCTCATGGAT ATGAAGTGGA CTTTGTGTCT CCCTCTGGAG GGCCGGTCGC CTTTATGATG
GACCCATTAG GGATCAGTAG TTATACGATA AAGTATGAAC ATTTTCTCGA TAAGGCCAAT
GCTTCATTAA CGCCTAAGCA AGTGAACCCA GAGGATTATG CCGCCGTTTT TATCGGTGGC
GGCTATGGCA CATTGTTCGA TGTGGCCTCG AACAAAACAT TGCTCGATAT TATGGCTAAG
ATTTATGAAA ACGGCGGGGT GCTCGGTAGC TGCGGTCATG GTGCCGGCGG CTTTGCTAAC
GTTCAACTGA GTGACGGTAA ATTTTTGGTG AATGCAAAGC GAGTAGCGGG CTTCCCTGAT
TCAACGGAGA AAGAAAAATC ATGGGCCAAA CAGGGGACCT TGTTGCCATT TCTCGTTGAA
GAGCAACTGA GAAAAAACAG TGCGGTTATC GTCAATAAGG AAAACATTGC CGATAAGCAT
GAAGTGATCA TAGATCAACG CATAGTCTCG ACCATGTTTT TGCCCTCTGC CGCCCTGGTG
GCAAAGGAAA TGATTATATT GCTTGAGAAA AGGTAA
 
Protein sequence
MKYLIIFLSI LFAVVLSPVQ AGEAKKILIV ASNMQDMGDP EQHDARNNLW EYAPPYHIFV 
SHGYEVDFVS PSGGPVAFMM DPLGISSYTI KYEHFLDKAN ASLTPKQVNP EDYAAVFIGG
GYGTLFDVAS NKTLLDIMAK IYENGGVLGS CGHGAGGFAN VQLSDGKFLV NAKRVAGFPD
STEKEKSWAK QGTLLPFLVE EQLRKNSAVI VNKENIADKH EVIIDQRIVS TMFLPSAALV
AKEMIILLEK R