| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2683 |
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| Symbol | |
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| ID | 4019200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3214654 |
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| End bp | 3215472 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956727 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_563685 |
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| Protein GI | 91794034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000101037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAG CAAAAATCTG TTTTATCGGC GCTGGCAACA TGACACGCAG CATAGTCAGC
GGCCTAGTGA CACACGGTTA CCCTGCAGAC TTGATCTACG CCACCAATCC AAGCCAAGGC
AAGCTTGATG CCATGGTGGC TGACTTCAAT ATCCAAGTCT CCAACGACAA TTTAGCCACG
GCTAAAGAGT GCGATGTCAT AGTGTTAGGC GTTAAACCGC AACTTATGCA GCAAGTGTGT
GAGGCGCTGC AACTGCTAGA TTTATCTGAT AAGTTAGTCA TCACTATCGC AGCAGGCATC
ACGGCTAATC GCTATGATGA CTATTTTAAG CAACAGGTCC CTTTGATCCG CTGCATGCCA
AATACCCCGA CCCAAATCGG TCACGGCATG ACAGGACTGT TCGCCGTTGA AGGTATTAAT
CAGCAACAAA AAAAATTGGC CGAAACCTTG ATGCTAACTG GCGGCAAAGT CATGTGGGTA
GATAAGGAAG CCGAACTTAA TTTGGTGATA GCCCTCGCGG GTAGCTCGCC AGCGTACTTT
TTCCTATTCG TAGAATCCAT GATTGAAGCC GGTGTAGCCT TAGGCATGGA TGAAACAAAA
TCACGATTAT TGGCCGAACA AGCCGCCCTT GGCGCGGCGC AGATGATAGT TAACAATCAA
GACTTAAGCC CAGCTGCGCT TAGAACCAAT GTCACCTCAA AGGGCGGCAC CACGGCCGAA
GCATTAGCCA CCTTTGAGCG CGGTGATATT CGCGGTTTGG TCAAACAAGC CATGGTGAAT
TGCATCAATA GAGCCGATGA AATGGCCAAA ACATTTTAA
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| Protein sequence | MTQAKICFIG AGNMTRSIVS GLVTHGYPAD LIYATNPSQG KLDAMVADFN IQVSNDNLAT
AKECDVIVLG VKPQLMQQVC EALQLLDLSD KLVITIAAGI TANRYDDYFK QQVPLIRCMP
NTPTQIGHGM TGLFAVEGIN QQQKKLAETL MLTGGKVMWV DKEAELNLVI ALAGSSPAYF
FLFVESMIEA GVALGMDETK SRLLAEQAAL GAAQMIVNNQ DLSPAALRTN VTSKGGTTAE
ALATFERGDI RGLVKQAMVN CINRADEMAK TF
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