Gene Sden_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2642 
Symbol 
ID4019159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3172025 
End bp3172711 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID637956686 
Producthypothetical protein 
Protein accessionYP_563644 
Protein GI91793993 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCC CAAGCTATTT TACCCCAGCA AGTTTTGATT TCCTGACCAA GCTTGAGCAC 
AATAATAACC GTGAATGGTT TAAGGCGAAT CAAGCGGAAT ATGAGTTGCA AGTCCGCACG 
CCGGCTCTGC ATTTTATTGA AGCCATGAGT GGCTCGGTAG TCGATTTATC ACCTAGGCTC 
ACCGCAGTGG CAAAGAAAGT GGGCGGCAGC TTAATGCGCC CGCAAAGGGA TAGCCGTTTT 
AGCAAGGACA AGACGCCCTA TAAACTTAAT GTCGGCATTC AATTTCGCCA TTTCCAAGCT 
AAAGATGTCC ATGCCCCTGG GCTTTACTTA CATCTAGCCA ATGACGGCTG CTTTATCGCA 
GCGGGCATTT GGCATCCAGA ATCCAAGGCA CTCAATGCCA TTCGCCATTG TATCGATGAA 
AACCCCAAGG GTTACCAGAA AGCCATCGCA AACTTAACCG CAGCAGGGTT CGAACTGTCG 
GGAGATAGCC TAAGCCGCCC ACCTAGAGGC TTTGATAAGA GTCACCCCTT GATTGATGAG 
CTTAAGCGCA AGGATTTTAT CGCCATTAAA GACATAAGCC TTGAGCAGGT GTGCCAATTA 
GACTTGGTTG ATTTTTGTGC CCAGCAATAC CAGTACACCA GCGCACTGAT GTACTATTTG 
TGTTTCGCCT TAGATTTGGA TTTCTAA
 
Protein sequence
MQTPSYFTPA SFDFLTKLEH NNNREWFKAN QAEYELQVRT PALHFIEAMS GSVVDLSPRL 
TAVAKKVGGS LMRPQRDSRF SKDKTPYKLN VGIQFRHFQA KDVHAPGLYL HLANDGCFIA 
AGIWHPESKA LNAIRHCIDE NPKGYQKAIA NLTAAGFELS GDSLSRPPRG FDKSHPLIDE 
LKRKDFIAIK DISLEQVCQL DLVDFCAQQY QYTSALMYYL CFALDLDF