Gene Sden_2523 details

Gene Information

• Locus tag: Sden_2523
• ID: 4019026
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3014360
• End bp: 3015031
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637956554
• Product: thioredoxin-like protein
• Protein accession: YP_563526
• Protein GI: 91793875

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.741385
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTAG TTCATTCCAG CATAAGAAGA AATCCATTGG CCGAACCCAG CTCATCTAAA 
CCTGGCTCAT CTCGAGCAGA TAGCCCGACC ATAAGCTCAA TTCCCCCAAC AGCGGCAGAA 
GCCGTTATAC CGCCCAATTG GCGACAGCGT ATCTTAACGG CATGTGCACA AGTTAAGCAG 
CGCCGTTTTT GGCTTCATTT ATTTCGAGAC TTAAGCCTAT TGCTGATCAT AGGGTTTGCC 
ATTGCAAGCT ATCAGCAACG TCACATGCTT AAAGATATAG CGCCTAGCCT CAATATGTTG 
ACAACTCAAG GCAGCATGGC ATTTTCAAGC TATGCCAATG AGCCCAAGGC GAAGCTTGTG 
TACTTTTTTG GTTCTTGGTG CCCAGTGTGC CGCTTCACGT CCCCCGAAGT TACCGCCATA 
GCGCAGGATT ACCCCACTAT CGCCATTGCC TTGGCTTCAG GTACCGATTT GCAGATCAAT 
CAATTTATGA CTCAAGAAGA CTACCAGTTC GATGTTATCA ATGATGATAA TGGCAGCATA 
AGTGAGATTT GGGGCGTTCA GGCAGTGCCG GCGTTTTATA TCTTAGATGA GCAAAATAAG 
ATTGTCTTCG TTACCTCAGG CGCCAGCTCA CAATGGGGGC TACGTCTTAG GCTTTGGTGG 
GCAAGCCTGT AG 

 

Protein sequence

MKLVHSSIRR NPLAEPSSSK PGSSRADSPT ISSIPPTAAE AVIPPNWRQR ILTACAQVKQ 
RRFWLHLFRD LSLLLIIGFA IASYQQRHML KDIAPSLNML TTQGSMAFSS YANEPKAKLV 
YFFGSWCPVC RFTSPEVTAI AQDYPTIAIA LASGTDLQIN QFMTQEDYQF DVINDDNGSI 
SEIWGVQAVP AFYILDEQNK IVFVTSGASS QWGLRLRLWW ASL