| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2521 |
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| Symbol | |
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| ID | 4019024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3011546 |
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| End bp | 3012718 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956552 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_563524 |
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| Protein GI | 91793873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.979889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATA AATGGAAGTC AGCAACGGTT GCGATTCATG GTGGTCATCA AAGAGAAGCG
TTTGGGGCGC TGGTGACACC TTTATACCAA AGTGCCACCT TTGCGTTTGA AACCGCAGAG
CAGGGCGGAG CGAGGTTTGC TGGGGACGAA CCTGGCTATA TTTATACTCG TCTTGGCAAC
CCAACCACGG CTGAACTCGA ACGAAAGATG GCGCTGCTAG AAGGCGCCGA TGATGCGGCT
GCAACGGCAT CTGGCATGGC GGCCGTGTCT GCTGCGCTAT TGACTCATCT GGAGCAAGGG
GACCATTTAA TTGCCTCTAA AGCCGTGTAC GGTTGCACCT ATGCGTTGAT AACCACCCAG
CTTTCCCGCT ATGGTATCAG CACAAGTTTG GTGGATTTTA GTGATATGCA AGCGGTTGAA
GCCGCTATAA AACCTAACAC TCGGGTACTT TTTTGTGAAA CGCCGGTGAA TCCCCATCTA
CAAGTGTTTG ATTTAGACGC CATGGCGAAA GTGGCTAAAA AACATGGGCT GATTAGCATA
GTGGATAACA CCTTTATGAC GCCACTGCTG CAAAAGCCAT TGGCTATGGG CATAGACATG
GTGATCCACA GCGCGACCAA ATATTTAAAC GGCCATGGTG ATGTGATTGC CGGCATAGTG
TGCGGCAACA GCGAGCATAT GCATAAATTG AGGTACGAGA TTTTAAAAGA CTTTGGCGGC
GTTATGTCTC CCCATGATGC TTGGCTTATT CTGCGAGGGC TTAAGACTTT AGATGTGCGC
TTAGCAAGGC ATTGTGATAA TGCCGAAATA TTGGCTAACT ACTTGGTTGA GCACAAGGCC
TTTTCCCAGG TGTTCTACCC AGGGTTAAGT ACCCATCAAG GTCATGCGTT TATTGGCAAG
CAAATGAAGC GTGCTGGTGG CGTGATAGCG TTTGAGCTTA AGGGTGATAA GCAAGATGCA
ATTAACTTTG TCAATCGTTT AAAGCTATTT ACCATAGCGG TAAGTTTAGG TGATGCTGAG
TCATTAATTC AACATCCTGC CTCCATGACT CACTCGCCTT ATACCTTAGA GGCCAGAATG
GAAGCTGGGA TCACTGATAA TTTATTGCGA ATTTCAGTGG GCCTTGAAGA TGTGCAAGAT
TTAATTGCTG ATATCGAGCA AGCGTTAGCG TAA
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| Protein sequence | MQDKWKSATV AIHGGHQREA FGALVTPLYQ SATFAFETAE QGGARFAGDE PGYIYTRLGN
PTTAELERKM ALLEGADDAA ATASGMAAVS AALLTHLEQG DHLIASKAVY GCTYALITTQ
LSRYGISTSL VDFSDMQAVE AAIKPNTRVL FCETPVNPHL QVFDLDAMAK VAKKHGLISI
VDNTFMTPLL QKPLAMGIDM VIHSATKYLN GHGDVIAGIV CGNSEHMHKL RYEILKDFGG
VMSPHDAWLI LRGLKTLDVR LARHCDNAEI LANYLVEHKA FSQVFYPGLS THQGHAFIGK
QMKRAGGVIA FELKGDKQDA INFVNRLKLF TIAVSLGDAE SLIQHPASMT HSPYTLEARM
EAGITDNLLR ISVGLEDVQD LIADIEQALA
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