Gene Sden_2474 details

Gene Information

• Locus tag: Sden_2474
• ID: 4018974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2952513
• End bp: 2952926
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637956502
• Product: competence protein ComEA helix-hairpin-helix region
• Protein accession: YP_563477
• Protein GI: 91793826
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins
• TIGRFAM ID: [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region; [TIGR01259] comEA protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTCT TATCAAGAAT GACAGCCAAA GTACGTCAGT TGATGACACT GCTCAGCACG 
CTACTACTGG CTTTATTACT GCTGAACCCG CTTCATGCCA CAGAACCTGA AATGAAAACA 
CCTAAAGCTA ACCCCGAAAA AGTGAAACTT GATCATGACA AGGCGGTTAA AGCAGAAATT 
CAAAAGGCTA AAAACAGTGC ATCACCGGAT GCGATGGACA GTTATAGAGT TAATATAAAT 
CGAGCCGATC TTGATGAATT ACAGCAGCTA AAAGGAATTG GTTTAGCGAA GGCGAAAGCG 
ATTATCGAAT ACCGTGAACA TAACGGTAAA ATTGATAGTT TAGATGAACT CACTCAAGTA 
TCGGGTATTG GTGAGAAATT TATCGAACAA AATGCAGATA AAGTCAGTTT TTAA 

 

Protein sequence

MTFLSRMTAK VRQLMTLLST LLLALLLLNP LHATEPEMKT PKANPEKVKL DHDKAVKAEI 
QKAKNSASPD AMDSYRVNIN RADLDELQQL KGIGLAKAKA IIEYREHNGK IDSLDELTQV 
SGIGEKFIEQ NADKVSF