Gene Sden_2467 details

Gene Information

• Locus tag: Sden_2467
• ID: 4018967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2941336
• End bp: 2943210
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637956495
• Product: hypothetical protein
• Protein accession: YP_563470
• Protein GI: 91793819
• TIGRFAM ID: [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000132009
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTTAA AGTTTGATAA AGCCCTTTCT ATCGTGGCAT TAAGCGTTTT AGGCGCATTA 
AGTGGTGCAC AAGCTGCACC TGTATATGAA ATTGTTAATA TTGAGAATTT TGATCTCAAA 
GGTACCCTAA CTGATACCCG TAACGGTTAT GCCATGGCGG TGAATGCCAA TAACGAATTA 
GTCGGTATTG CCAAGGGCAC CAAGAAGCTG ACGGTTGAAG ATATTCAAGG TGGTATTGTC 
GATGTGGAAG ACGGCATAGC GCCGGAAGCA AAAATTGAAT ACTCAATTTT CAAGCCTGTC 
GTTGCCAATA ATTTCACCTT TACAGCAGAA GAAAATGATG CCGTTTCACC TTGGAACCTG 
CATTTTTTAA GCATCAATGG TTCAGTTGAG CCAAGTCAGC AAGATGCTAC TTCGATTAAT 
TCAGTCGATA GTTTTTTTTA CGACATCAAT GATGCCGGCG TTAAAGTGGG TTCTTATAGT 
GGAGTAGAGA AAAAACAAAC TTATGTTGGT GATCTGACTA ACCAAGATTT TTGGTATTAT 
CGTGACTTTG AATTACGCGC AGTGGCAGTG AATAATGACG CACAAGTGCC ATTATTACCT 
CCTTATACGA CGTATGTTCG TCCGGCTAAC GCAGCTGACA ATGTCGTTGA GACAAGTGTT 
GAGTTAGGCG GGATTTCTGT CGCTGCTGCA ATCAATCCAA ACAATCTTAT TGTGGGTTAT 
GCCAGTACAG CACTTGCCAG TTTCAGTGCA GATAGAATTA ATGCCTGTAT TGACGCCGCG 
CTAGCCACTG GAGCTGTTAA TCCTACACCT ATCAATATTT GTGTGCAGTC AAATCAATAC 
CCAGTGAATA ATACTCGTAA TGTGCAGTAT CAAACTCGTG CCTATGTATG GCAGTTGGAC 
GATGCTAATA ATGTCACTGG TACTGAATTG CCTTTAGGGT TAACGCCACC AGAAGGCTCG 
ACCTTAGTGT ACACAGCACA AGGTCTTGGA GTGAATACGG CTGGAACAGT TGCTGGGCGT 
TCACATGTGT TCCGTAATGG CAATCAAGAT TCACTCTATG CAGATGCGGC CTACTGGACT 
AAAGACAGCA ATGGCACATA CCAATATTCT TGGGTCAAAA TGGCCAATGA GGTCTTTAAC 
TCTATCGCCT ATGATATCAA TGACAATGGC TTGCTTGTGG GCAGCTATAG CCAATATATT 
CAAGGCTATC CCCGTAATAA ATTCTTCTAT TTTGACACTA AAAATCCAGA TGCGGGTATC 
GTTACTCCTG ATGATTTAAA AGTGGGTTTG TCGGATTTAA GCAGTAAGCC CAAAGATATT 
AACAATAAAG GTCAAGTTGT TGGTCATATT GAAACTACCT TCGATAAAGA TAAACCAAGA 
CCTAAAGCTG GCTTTTTGTT TGACATTGCA ACAAAAGAGT TTTCTAACCT TAATAGTTTA 
CTGACTTGTG ATTCTCAAGG GTACACAAAA GATGCTAATG ATACTTGGGT ACGTAATAAG 
GTCAACATCA CAGATGGTTC TGGTGGTGCG CTAAGTTATG AAACTGATAT TCAAGTGGTA 
GAAGCTAATA GTATTAATGA AGACGGCACC ATAGTCGGTA CTGCTTTTGT GCGTAAACCA 
CAATACCAAA TAGACAGTAC GGGTAACGTA ATATTAGGTA CTAACGGTCA ACCATTGTTT 
GCTTTGGATG GTAATGGCAA TCCAGTGACA GCATATTTAC CACGTATGGT GGTGCTAAAG 
CCAACGACCA GTGGTGTCGT TTGTGATCTA ACTAAAACTG AGATCGAAAA CAATTATGAG 
CGTAAGGGCG CGGCCAGTTT CGCTTGGTTA TTCGCATTAC CTTTACTTTG GTTACGTCGT 
CGTAGCCAGA AATAG 

 

Protein sequence

MTLKFDKALS IVALSVLGAL SGAQAAPVYE IVNIENFDLK GTLTDTRNGY AMAVNANNEL 
VGIAKGTKKL TVEDIQGGIV DVEDGIAPEA KIEYSIFKPV VANNFTFTAE ENDAVSPWNL 
HFLSINGSVE PSQQDATSIN SVDSFFYDIN DAGVKVGSYS GVEKKQTYVG DLTNQDFWYY 
RDFELRAVAV NNDAQVPLLP PYTTYVRPAN AADNVVETSV ELGGISVAAA INPNNLIVGY 
ASTALASFSA DRINACIDAA LATGAVNPTP INICVQSNQY PVNNTRNVQY QTRAYVWQLD 
DANNVTGTEL PLGLTPPEGS TLVYTAQGLG VNTAGTVAGR SHVFRNGNQD SLYADAAYWT 
KDSNGTYQYS WVKMANEVFN SIAYDINDNG LLVGSYSQYI QGYPRNKFFY FDTKNPDAGI 
VTPDDLKVGL SDLSSKPKDI NNKGQVVGHI ETTFDKDKPR PKAGFLFDIA TKEFSNLNSL 
LTCDSQGYTK DANDTWVRNK VNITDGSGGA LSYETDIQVV EANSINEDGT IVGTAFVRKP 
QYQIDSTGNV ILGTNGQPLF ALDGNGNPVT AYLPRMVVLK PTTSGVVCDL TKTEIENNYE 
RKGAASFAWL FALPLLWLRR RSQK