| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2455 |
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| Symbol | trpA |
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| ID | 4018954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2926448 |
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| End bp | 2927293 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956482 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_563458 |
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| Protein GI | 91793807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACA CAATAACTAA CGCAATGACT CACGAAATGA GCAACAGATA TCAGCAAGCT
TTTGCAGCCC TGAATGCCAA AAATCAAGGC GCGCTAGTGC CGTTTGTGAC CTTGGGCGAC
CCAAGCTTTG AATTGTCACA AAAAATCATT AATACCTTGA TAGAAAGTGG CGCCGATGCC
CTAGAGCTCG GCTTTCCCTT CTCAGATCCT CTCGCAGATG GCCCCGTGAT CCAAGGTGCC
AACTTAAGGG CGTTAGAGGC CGGCATGAAG ACCAAAGATT GCTTTGAGCT TATCCGCCAA
ACTCGCGCCG CCCACCCAGA TTTACCCATA GGGTTGCTCT TATACGCTAA CTTAGTGTTT
GGTAACGGCA TAGATAATTT CTACGCCAAG GCAAGCGAAG CTGGGGTCGA TTCAGTGCTT
ATCGCCGATG TGCCCGTGGA AGAGGCTGCG CCCTTTATTG AGTCTGCCAA AAAGCATGGC
ATAGCCCCGA TTTTTATCGC CCCGCCAAAC GCCGATGACG ACACCTTACG CGCTGTCAGT
AGTAAAGGCG AAGGCTACAC CTATTTACTG TCCCGCGCAG GCGTCACAGG CACAGAATCA
AAAGCGGGCG AGCCCATAGA AGCCATCTTG GCAAAGCTGA GCGAATTTCA CGCCCCCCCG
CCCCTGCTTG GGTTTGGTAT CGCCGAACCT GCCCAAGTGG CCGCCGCTAT CAAAGCCGGC
GCCGCAGGTG CTATCTCAGG CTCCGCCGTG GTTAAAATTA TCGAAGCCCA TAAGGATGAT
GAAGCCAAGC TGCTATCTAC TTTAAGCGAC TTCATCAAAG CCATGAAAGC CGCAACTTAT
AAGTAG
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| Protein sequence | MTNTITNAMT HEMSNRYQQA FAALNAKNQG ALVPFVTLGD PSFELSQKII NTLIESGADA
LELGFPFSDP LADGPVIQGA NLRALEAGMK TKDCFELIRQ TRAAHPDLPI GLLLYANLVF
GNGIDNFYAK ASEAGVDSVL IADVPVEEAA PFIESAKKHG IAPIFIAPPN ADDDTLRAVS
SKGEGYTYLL SRAGVTGTES KAGEPIEAIL AKLSEFHAPP PLLGFGIAEP AQVAAAIKAG
AAGAISGSAV VKIIEAHKDD EAKLLSTLSD FIKAMKAATY K
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