| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2424 |
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| Symbol | |
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| ID | 4018922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2884060 |
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| End bp | 2885412 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637956451 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_563427 |
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| Protein GI | 91793776 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00633842 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT TAATTACTAC AGCTGTGCTA GCTGCCAGTT TCTCTCTATC AGCCATGGTT
TCAGCTGCTG ATGCGCCAAA GAGCATTGAT CAACTGCTTA AGCAGGTTCA AGTCGATCGC
GCTAACGATA GTAAAACCAA CGCTAAGCGT GAGAGGGAAT TTCAAAATGA GCGCGGTGAC
AAAGCGGCAT TATTAAAGCG TGAGAAAAAT GCTTTAGCTG CAGAAAGACA ACGCGGTAAA
GATTTAAACC AAGCCTTCTT GGACAACGAG CGTAAATTAG CTCAGTTAGA AGAAGACTTA
AAAACAGCTC AGGGTGACTT GGGTGAGATG TTTGGTGTTG TTAAAGGTGA AGCCGGTGAT
TTCGCAGGTA AACTAGCCGC TTCAAATACC AGTGCTCAGT TCCCCGGCCG TGATGCGTTC
ATCGCCGAAC TGGGTGCACG TAAGCAATTA CCGAAAATAG AAGAATTAGA GAAATTCTGG
GAAGCTCAAC TGTTCGAAAT GGTTGAATCT GCGAAAGTGG TTAAATTCCA AGGTTCTGTA
ACTGACATCG ACGGTAATGT TGTTGAAACG ACTATTCACC GTGTCGGCCC GTTTAACTTA
ACAGCAAATG GTAAGTATGT TGTGTACAAA CCTGAGTTGA ATTTAGTTCA ACAGCTATCA
CAACAACCTG ATGGCTACCA AGTAAGTGCT GTGGGTTCAT GGGAAGACAT CTCTACTGGT
GTAGCTCCAT TCTATGTTGA CCCTGCGCGT GGTGTGTTAC TGAACATATT CACTAACAAG
GCTAGCATCG AAGACCGTAT CGAAGCCGGT GGACCAATTG GTTATATCAT TATTGCCTTG
TTGGCTCTAG GCGCATTAAT TGCGTTAGAA CGTCTTGTGA CTTTGACCAT CATTGGTGGC
AAGGTGAACA GCCAACGTAA GAACATCGAT AATCCAGGTA ACAACGCCTT AGGCCGTATT
CTTAAAGTTT ATCAAAACAA CAAAGATGTT GATGTTGAAA CATTAGAGTT GAAACTTGAT
GAAGCTATCC TAAAAGAAAC GCCTGCGCTA GAAGCTCGTA TTTCTATCAT TAAGGTATTA
GCAGCTATCG CACCTATGAT GGGTCTTCTT GGTACTGTGA CCGGTATGAT TGCGACATTC
CAATCCATTC AGTTATTTGG TACTGGCGAT CCTAAGTTGA TGGCAGGTGG TATTTCTATG
GCGCTTGTTA CTACGGTACA GGGTCTAATC GCTGCTCTTC CATTAATGTT ATTGCATGCT
ATTGTTGTTG CTCGTAGTAA ATCAATCGTC CAAGTTCTCG AAGAGCAAAG TGCTGGTATT
ATTGCCGAGC ATGCTGAGAA GAGGGCTAAC TAA
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| Protein sequence | MKKLITTAVL AASFSLSAMV SAADAPKSID QLLKQVQVDR ANDSKTNAKR EREFQNERGD
KAALLKREKN ALAAERQRGK DLNQAFLDNE RKLAQLEEDL KTAQGDLGEM FGVVKGEAGD
FAGKLAASNT SAQFPGRDAF IAELGARKQL PKIEELEKFW EAQLFEMVES AKVVKFQGSV
TDIDGNVVET TIHRVGPFNL TANGKYVVYK PELNLVQQLS QQPDGYQVSA VGSWEDISTG
VAPFYVDPAR GVLLNIFTNK ASIEDRIEAG GPIGYIIIAL LALGALIALE RLVTLTIIGG
KVNSQRKNID NPGNNALGRI LKVYQNNKDV DVETLELKLD EAILKETPAL EARISIIKVL
AAIAPMMGLL GTVTGMIATF QSIQLFGTGD PKLMAGGISM ALVTTVQGLI AALPLMLLHA
IVVARSKSIV QVLEEQSAGI IAEHAEKRAN
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