| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2390 |
|---|
| Symbol | ndk |
|---|
| ID | 4018888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2842195 |
|---|
| End bp | 2842626 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637956417 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_563393 |
|---|
| Protein GI | 91793742 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00297694 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AACGCACATT TTCTATTATC AAGCCAGATG CAGTTGCTAA AAACCACATT
GGCGCTATCT ACAACCGTTT TGAATCAGCG GGTCTTAAGA TCATCGCTTC TAAAATGGTT
CACCTGACTA AAGAACAAGC TGAAGGCTTC TACGCTGAAC ACAGCGCACG TCCTTTCTTC
GGCGCGCTAG TGTCTTTCAT GACTTCAGGT CCAGTAATGG TTCAAGTGTT AGAAGGCGAA
AACGCTGTTC TAGCTAACCG TGAAATCATG GGTGCAACTA ACCCAGCTGA AGCGGCTCGT
GGCACTTTAC GTGGTGACTA CGCAGCGAGC ATCGACGAAA ACGCAGTTCA CGGTTCTGAT
GCACTTGAAT CAGCAGCTCG TGAAATTGCT TACTTCTTCA GCGCTGATGA AGTGTGCCCA
CGCACACGTT AA
|
|---|
| Protein sequence | MAIERTFSII KPDAVAKNHI GAIYNRFESA GLKIIASKMV HLTKEQAEGF YAEHSARPFF
GALVSFMTSG PVMVQVLEGE NAVLANREIM GATNPAEAAR GTLRGDYAAS IDENAVHGSD
ALESAAREIA YFFSADEVCP RTR
|
|---|
| |