Gene Sden_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2225 
Symbol 
ID4018717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2643215 
End bp2643922 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID637956247 
Producthypothetical protein 
Protein accessionYP_563228 
Protein GI91793577 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTAA ATAAACCGAT TAGATTGGTG CCCGTCATAC TGGCCGCCGG AGGCAGTCGG 
CGCTTTAATG GGGTAAAGCT TATGAGCAGG CTTAATAATG GCAAGCTTTT ACTCGAGCAC
AGCATTCAGC AGTTGCAGCT AGGCTGTGAG CAGTTTCAGG CTCAGCAAGA CGGCGTGCAT
TCAAACGCAA GTGTTAATCA CAGTGTTGAC ATTTCTAGGC TCGAACTCTC TCCTGTGACA
GTCATTTTGG GCGGCCACCA TGAGTGCTTA GCCCCGCTAT TGCCAAGCGG CATGGCTTAT
CGGCTAAATC CAGATTGGCA TCAAGGCTTA AGCAGCTCGA TTCGAGTCGC GGTTAAGCAT
GCAGCTGAGC TTGATGCCGA TGCCTTATTG CTGACATTAG CCGATCAAGT GGCTCTCGAG
TCTCACGATT ACGCTGCGCT ATTCGCGCTG TTTTGTGGCA GATTTTCACA AGGCGCTCCC
CATAGCGGAC AGACAACGGC GGCTTTTTAT CGGCAAACTC CTGGGGTTCC TGCTATTTTT
TTAGCTGATG ATTTTTCTGC CTTGAGTCAA TTAAACGCAG ATAAAGGCGC TAAGGCCATT
TTAGTTGAAC GCCATAACCG TCAACAATTA CAGCTATTGC CACTGGAACA AGCGGCGATA
GATATCGACA CCCAAACAGA GTTATCCTTA TGGTTGGCTG ATGCCTAG
 
Protein sequence
MPLNKPIRLV PVILAAGGSR RFNGVKLMSR LNNGKLLLEH SIQQLQLGCE QFQAQQDGVH 
SNASVNHSVD ISRLELSPVT VILGGHHECL APLLPSGMAY RLNPDWHQGL SSSIRVAVKH
AAELDADALL LTLADQVALE SHDYAALFAL FCGRFSQGAP HSGQTTAAFY RQTPGVPAIF
LADDFSALSQ LNADKGAKAI LVERHNRQQL QLLPLEQAAI DIDTQTELSL WLADA