Gene Sden_2051 details

Gene Information

• Locus tag: Sden_2051
• Symbol: tmk
• ID: 4018543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2435041
• End bp: 2435688
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637956075
• Product: thymidylate kinase
• Protein accession: YP_563056
• Protein GI: 91793405
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAG CACAGCAGCA AGACATAGGC AAGTTTGTGG TTATCGAAGG CCTAGAGGGC 
GCGGGTAAAT CCAGCGCCGT GGCCTTAGTT AAGGCACTGC TGACATCCCA TACTGGCCAT 
GAGCCCGTGT GTACCCGCGA GCCTGGTGGA ACGCCACTGG CTGAGCGCAT TCGCGATTTG 
GTAAAAATTG CTGACCCGCA AGATCCCCTC TGTGATGAAG CCGAATGCCT GCTGATTTAT 
GCGGCTCGCG CACAACTTAT CGCCAATGTG ATAAAACCTG CGCTACAGCG CGGCGAATGG 
GTATTGGGAG ACAGGCATAA TCTGTCATCC CTTGCCTATC AGGGCGGCGG ACGTGGCCTG 
ATGCCCTTAG TGAACACCTT GAGCCAAGCC TGTTTACAAG GCTTTAAGCC AGACTTAACC 
TTGTACCTGG ATATTGAGCC AAGCCTTGGC TTAACAAGGG CAGCTAATCG CGGCGCCCTA 
GACAGAATTG AGCAACAAGC GCTAGCATTT TTTGAACGCG CCCGTGAGAC CTATTTGCAA 
TTGGCAAGCC AAGACAGCAG CATTTTGGTT ATAGATGCCA GCCAGAGCCT TGAAGCCGTG 
CACCATGATA TCAAGCAGGC GCTGGCCGCT AGGCTTGTAG GGTGTTGA 

 

Protein sequence

MTAAQQQDIG KFVVIEGLEG AGKSSAVALV KALLTSHTGH EPVCTREPGG TPLAERIRDL 
VKIADPQDPL CDEAECLLIY AARAQLIANV IKPALQRGEW VLGDRHNLSS LAYQGGGRGL 
MPLVNTLSQA CLQGFKPDLT LYLDIEPSLG LTRAANRGAL DRIEQQALAF FERARETYLQ 
LASQDSSILV IDASQSLEAV HHDIKQALAA RLVGC