Gene Sden_2044 details

Gene Information

• Locus tag: Sden_2044
• ID: 4018536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2426251
• End bp: 2428206
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637956068
• Product: acetyl-CoA synthetase
• Protein accession: YP_563049
• Protein GI: 91793398
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.408247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCGC CAACTGTTTA CCCAGTACCC AGCCAGATCA GTGCCCATGC TCATATCGAT 
GAGCAAACCT ACCAGCGCAT GTATCAGGCC TCTATCGACA ATCCAGAGCG CTTCTGGGGC 
GAACAAGGCA AACGCATAGA TTGGATCACC CCTTACAGTC AAACTCAAGT GAAGAAAACC 
AGCTTCGATG CAAACAACTT GTCTATCCAA TGGTTCGCCG ATGGCACACT GAATGCCTCA 
AGTAATTGCC TCGACAGGCA CCTTGAGCGC AATGGCGACA AGATTGCCAT CCTCTGGGAA 
GGTGATGATG CCAAAGAGCA GCGCCAATTA AGCTATCGTG AGCTTCACAC CCAAGTGTGT 
CAGTTTGCCA ATGTGCTTAA AGCTCAAGGG GTAGTGAAGG GCGATATCGT TACCCTTTAT 
ATGCCCATGG TGCCAGAGGC CGCCGTGGCC ATGTTAGCCT GCGCCCGCAT TGGCGCCGTG 
CATTCGGTGA TTTTTGGCGG TTTCTCACCA GATTCTATCG CTTCACGCGT GATTGATGGT 
AAATCAAAAG TTATCATCAC CGCCGATGAA GGCATTCGCG CTGGCCGCAC TATCCCCCTA 
AAACACAACG TCGATGAAGC CCTAGCCCGT CCTAGCGTCA CTTGCGTGAA TAATGTCATC 
GTGCTTAAAC GCACAGGCGC CAACGTTGAC TGGCAGCAAG GTCGTGATTT GGACTGGGAT 
GAATTAATGG CTGGCGTCAG CAGTGATTGC CCCGCCGAAG AAATGAACGC AGAAGATCCG 
CTATTTCTAC TCTACACTTC AGGCTCGACC GGTAACCCAA AAGGCGTGCT GCATACCACA 
GGCGGCTATC TGGTTTATGC CGCCATGACT CATGAATATG TTTTTGATTA TAAAGAAAAT 
GAAGTCTATT GGTGCACCGC CGATGTTGGC TGGATCACAG GCCATTCCTA CATGGTTTAC 
GGCCCCTTTG CCAATGGGGC TACTGTGCTG ATGCACGAGG GCGTGCCCAA CTATCCCACC 
CCTGCCCGCC TCGGCGAAAT AGTGGACAGG CATAAAGTGA ATATCCTCTA TACCGCGCCC 
ACGCTAATTC GGGCATTAAT GGCCGAAGGC AAGGAGCATT TCAACGGCTT TAGTGGCGAG 
TCATTACGCA TTATGGGGTC TGTGGGCGAG CCCATTAACC CAGAAGCCTG GCGTTGGTAC 
CACGAAGTCA TCGGCCATGA GCATTGCCCT ATCGTGGATA CTTGGTGGCA AACTGAAACC 
GGCGGCATCC TAATCAGCCC ATTACCAGGC GCCATTGCCA CTAAACCTGG CTCAGCGACT 
CGGCCTTTCT TTGGAGTAAA GCCTGCTATT GTGGATAGCA CGGGACAAAT ACTTGAGGGC 
GCTGTGGAAG GCAATCTGGT GATGTTGGAT TCTTGGCCGG GTCAGATGCG CACTGTGTAT 
GGCGACCATG CACGCTTCGC CCTCACCTAC TTTAGTACCT TTAAAGGCAT GTATTTCACC 
GGTGATGGTG CAAGACGTGA TGAAGACGGG TATTACTGGA TAACAGGTCG AGTGGACGAT 
GTGATAAACG TCTCAGGCCA CCGCCTCGGC ACTGCGGAAG TTGAAAGCGC ATTGGTGGCC 
CATGAGCAGG TCGCCGAAGC TGCGGTTGTG GGCTATCCCC ATGACATTAA AGGCCAAGGC 
ATTTACGCCT ACGTCACTTT AGTCCATGAC GCCGAGCCTT CAGAGGCCCT GCGTCAAGAA 
TTAAGGCAGT GGGTCCGTAA AGAAATTGGC GCTCTGGCAA CCCCAGATCT GATTCAATGG 
GCCACAGGCT TACCTAAGAC ACGTTCAGGC AAGATAATGC GCCGCTTCCT GCGTAAAATT 
GCCGCCAATG AAGTCACCAA CTTAGGGGAT TCATCCACCT TGGCCGATCC CTCCGTCATA 
GACACCTTGA TCGCCAGCCG CTTAAATCAG CGTTAA 

 

Protein sequence

MNSPTVYPVP SQISAHAHID EQTYQRMYQA SIDNPERFWG EQGKRIDWIT PYSQTQVKKT 
SFDANNLSIQ WFADGTLNAS SNCLDRHLER NGDKIAILWE GDDAKEQRQL SYRELHTQVC 
QFANVLKAQG VVKGDIVTLY MPMVPEAAVA MLACARIGAV HSVIFGGFSP DSIASRVIDG 
KSKVIITADE GIRAGRTIPL KHNVDEALAR PSVTCVNNVI VLKRTGANVD WQQGRDLDWD 
ELMAGVSSDC PAEEMNAEDP LFLLYTSGST GNPKGVLHTT GGYLVYAAMT HEYVFDYKEN 
EVYWCTADVG WITGHSYMVY GPFANGATVL MHEGVPNYPT PARLGEIVDR HKVNILYTAP 
TLIRALMAEG KEHFNGFSGE SLRIMGSVGE PINPEAWRWY HEVIGHEHCP IVDTWWQTET 
GGILISPLPG AIATKPGSAT RPFFGVKPAI VDSTGQILEG AVEGNLVMLD SWPGQMRTVY 
GDHARFALTY FSTFKGMYFT GDGARRDEDG YYWITGRVDD VINVSGHRLG TAEVESALVA 
HEQVAEAAVV GYPHDIKGQG IYAYVTLVHD AEPSEALRQE LRQWVRKEIG ALATPDLIQW 
ATGLPKTRSG KIMRRFLRKI AANEVTNLGD SSTLADPSVI DTLIASRLNQ R