Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2013 |
Symbol | |
ID | 4018505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2389592 |
End bp | 2390653 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637956038 |
Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
Protein accession | YP_563019 |
Protein GI | 91793368 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAGT CTTGGGTCAA TCGCGCCATC GGGCTTATTG AAGCGGATTT TCAGCGCAGC GCCGATACAC ACCTCATCAA ACTCGACCTG CCGCAGCTTG AAGGGGTCGA TATTTACCTC AAAGATGAAA GCACCCATCC CACTGGCAGT TTAAAGCACC GCCTAGCTCG CTCGTTGTTT CTTTACTCCC TGTGTAATGG CTGGATAAAA CAAGACACCC CCATTATCGA GTCCTCCTCA GGCAGTACCG CCATTTCTGA GGCGTACTTT GCCCGCCTAC TAGGCTTGCC TTTTATTGCC GTGATGCCAA AGAGCACGGC TAAGAAAAAA ATCCAACAAA TAGAGTTCTA CGGTGGTAAG TGCCATTACG TCGACAAAGG CAGTGAGATC TACGCCGAAT CAGAGCGTTT AGCCGAAGAG CTTAGTGGTC ATTATATGGA TCAATTTACT TATGCGGAGC GGGCAACGGA CTGGCGCGGC AACAATAATA TCGCCGATTC CATTTTTAGT CAGATGCAAA AAGAGCCTCA CCCTGTGCCT CAGTGGATAG TCATGAGTCC AGGCACTGGC GGCACGTCAG CGACCATAGG TCGATATTTA CGCTATCAGC AAATGACGAC TCAGCTGTGT GTGGTGGACC CAGAAAATTC GGTGTTTTAT GATTATTATC ACACGGGTGA TGCAAGCCTC ACGGATTGCA GCGGCAGCAA AATAGAGGGC ATAGGCCGGC CGCGAGTCGA GCCATCATTT ATTGCCGGCG TGGTGGATGA GATGAAACGC ATCCCAGATG CGGCCTCCAT TGCTACCATA CACTGGCTAG AGCAGCTTAT TGGCCGCAAG ACTGGGGCAT CCACAGGCAC CAACTTGTAT GGCGCCCTGC TACTGGCCAC TCAGATGCGT GAACGGGGTG AGTCAGGCTC TATCGTGACC TTAATCTGCG ACTCAGGTGA GCGTTATTTG GATACCTATT ATGATAATGC TTGGATTGAA GCACACATTG GTGACATCAG TGTGTACCAG AATAAGCTCG CCGCCTTCGA CTTGTGTGGC CTTATTGAGT AA
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Protein sequence | MSQSWVNRAI GLIEADFQRS ADTHLIKLDL PQLEGVDIYL KDESTHPTGS LKHRLARSLF LYSLCNGWIK QDTPIIESSS GSTAISEAYF ARLLGLPFIA VMPKSTAKKK IQQIEFYGGK CHYVDKGSEI YAESERLAEE LSGHYMDQFT YAERATDWRG NNNIADSIFS QMQKEPHPVP QWIVMSPGTG GTSATIGRYL RYQQMTTQLC VVDPENSVFY DYYHTGDASL TDCSGSKIEG IGRPRVEPSF IAGVVDEMKR IPDAASIATI HWLEQLIGRK TGASTGTNLY GALLLATQMR ERGESGSIVT LICDSGERYL DTYYDNAWIE AHIGDISVYQ NKLAAFDLCG LIE
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