| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1953 |
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| Symbol | nrdB |
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| ID | 4018442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2316985 |
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| End bp | 2318115 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637955975 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_562959 |
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| Protein GI | 91793308 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0325692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTATT CTACATTTTG TCAAACTCCG AACGATGCCA CCAAAGAACC CATGTTCTTT
GGGCAATCGG TCAACGTGGC TCGCTACGAT CAGCAAAAAT ACGACATATT TGAAAAGCTC
ATCGAAAAAC AATTGTCTTT CTTTTGGCGC CCAGAAGAAG TTGATGTCAG CCGCGACAAG
ATTGACTTTA CCGCCTTACC TGAGCATGAG AAGCATATTT TTATCTCTAA TCTTAAGTAC
CAAACCTTGC TGGACTCTAT CCAGGGCCGT TCGCCCAACG TGGCTTTCTT GCCGTTAGTG
TCACTGCCTG AGCTTGAGAC GTGGATTGAG ACTTGGTCCT TTTCAGAAAC CATTCACTCA
CGTTCTTACA CCCATATCAT ACGTAATATT GTTAACGACC CTTCGGTTAT CTTCGATGAT
ATCGTCGTGA ATGATGAAAT TTTAAAACGT GCCGGTGACA TTGCAAAGTA CTACGATGAC
TTAATCCATT TAACCCAGAT TTTTAATCTT CACGGTGCGG GTACTCACCT TATCGAAGGC
AAGCAAGTCA CAGTGAACTT AAGGGTGTTA AAGAAATCCC TTTACCTGTG CATGATGTCA
GTCAATGCTC TAGAAGCCAT TCGCTTCTAC GTCAGTTTTG CCTGTTCATT CGCTTTCGCT
GAGCGCAAAC TCATGGAAGG CAATGCCAAG ATCATCCGCT TAATTGCCCG CGATGAAGCC
TTGCACCTTA ACAGCACTCA ACACATTTTA GCCTTGATGC AAGGTGGCAA AGACGATCCA
GAAATGGCAG AAATTGCCAT AGAATGCCAG CAGCAAGCCT ATGATTTATT CTATAAAGCC
GCCGAGCAAG AAAAAGAATG GGCTAAATAC CTGTTCAAAG ATGGCTCAAT GATAGGCCTT
AATGAGCAGA TCTTGTGCCA ATATGTGGAA TACATCACCA ACCAAAGAAT GAAATCGGTT
CATTTGCCCC AGCCTTATGC TGAAATTTCT AATCCTTTAC CTTGGATGAA AAATTGGCTA
GAAAGTGATG CTGTGCAAGT AGCCCCTCAA GAAGTGGAAG TGTCCTCCTA CCTAGTAGGC
CAGATTGACT CTTCCGTTAA CAGCGACGAG TTCTTAGATT TTGACTTATA A
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| Protein sequence | MAYSTFCQTP NDATKEPMFF GQSVNVARYD QQKYDIFEKL IEKQLSFFWR PEEVDVSRDK
IDFTALPEHE KHIFISNLKY QTLLDSIQGR SPNVAFLPLV SLPELETWIE TWSFSETIHS
RSYTHIIRNI VNDPSVIFDD IVVNDEILKR AGDIAKYYDD LIHLTQIFNL HGAGTHLIEG
KQVTVNLRVL KKSLYLCMMS VNALEAIRFY VSFACSFAFA ERKLMEGNAK IIRLIARDEA
LHLNSTQHIL ALMQGGKDDP EMAEIAIECQ QQAYDLFYKA AEQEKEWAKY LFKDGSMIGL
NEQILCQYVE YITNQRMKSV HLPQPYAEIS NPLPWMKNWL ESDAVQVAPQ EVEVSSYLVG
QIDSSVNSDE FLDFDL
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