| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1938 |
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| Symbol | |
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| ID | 4018427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2294538 |
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| End bp | 2295458 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955960 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_562944 |
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| Protein GI | 91793293 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAA CTATCACTCA GGTTGCATTC ATTGGTTTAG GAAACATGGG CGGCCCGATG
GCAGCCAATT TAGTCAAAGC GGGCCTTAAG GTGACAGTGT TCGATCTTAT GCCCCAAGCC
GTCGCCGAAC TGGTTAAGCT AGGTGCCAAT AGCGCCGCTT CTGCCAATGA GGCGGCAGCT
AACGCCGATG TCGTGATAAC CATGTTGCCA GCAGGCAAGC ATGTGCGAGG CCTATATTTA
GGCAATGCAC AAGCCGATCA GCAGGGCTTA TTGGATGTGG TGGCGAGCCA CTGTTTGCTG
ATTGACTCCT CAACCATAGA TGCAGCCAGT GCCCAGCTTG TGGGACAAGC CGCAAAAGCC
AAAGGGCTTG AGTTTATCGA TGCGCCGGTT TCTGGCGGCA CCGCAGGTGC GGCAGCAGGC
AGCTTGACCT TTATCTGTGG TGGCAGTGAC AAGGCTTATG CCATGGCCCA AGAAGTGCTT
GGGATCATGG GCGGCAATAT TTTCCACGCA GGTGACGTAG GTGCTGGTCA AATCGCTAAG
ATTTGTAATA ACATGCTGCT GTCAGTGTTA ATGGTGGGCA CCAGTGAGTC CCTGCAGATG
GGTATAGACA ATGGTCTTGA CCCTAAAGTC TTGTCTGACA TCATGAAAGT CAGCAGTGGC
GGCAACTGGA CCTTAGAGAA ATACAACCCA TGCCCCAATG TGATGGACAA TGTCCCTTCC
TCTAAAGCCT ATCAAGGCGG CTTTATGGTC GATTTAATGG TGAAAGACTT AGGGTTATCT
CAAGAGGCGG CGCTGGCATC AAATTCAAGC ACCCCTATGG GAGCATTAGC CCGCAGCTTG
TACGTTAACC ATGCTCGCCA AGGTCATGGT AAACTGGACT TCTCGAGCAT ATTTGAACAA
TTTGCCAATA AAAATAAGTA A
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| Protein sequence | MTQTITQVAF IGLGNMGGPM AANLVKAGLK VTVFDLMPQA VAELVKLGAN SAASANEAAA
NADVVITMLP AGKHVRGLYL GNAQADQQGL LDVVASHCLL IDSSTIDAAS AQLVGQAAKA
KGLEFIDAPV SGGTAGAAAG SLTFICGGSD KAYAMAQEVL GIMGGNIFHA GDVGAGQIAK
ICNNMLLSVL MVGTSESLQM GIDNGLDPKV LSDIMKVSSG GNWTLEKYNP CPNVMDNVPS
SKAYQGGFMV DLMVKDLGLS QEAALASNSS TPMGALARSL YVNHARQGHG KLDFSSIFEQ
FANKNK
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