| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1908 |
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| Symbol | |
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| ID | 4018396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2240914 |
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| End bp | 2241717 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955929 |
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| Product | lipolytic enzyme, G-D-S-L |
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| Protein accession | YP_562914 |
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| Protein GI | 91793263 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000035223 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATA AGGGAATATC ACTTTTGCTT GCGCCGCTGT TGCTGTTGCA GGGCTTACAA
GTGCGTCGTA CAACACCAAG GCTTGCTGAA CCTAAGGGTG AACGTATGGG CCAAACTGGA
GACAATCCAA GCTTAAGTGT GCTTATTTTG GGGGATTCCG CCGCATTGGG TGTGGGCGTT
GATAATCAAC AAGACGCACT ACTGGGTCAA GTGATTCATC ATCTAAAACC TTTTGGTGAG
CTGAGTTTCA GCCTATTTGC CAAAACAGGC GCCACCACAG CAAGTACTTT ACAAACCCTA
GAAAAAAACC TTCACGGCAA GCATCCCATT CTCAGTCAAG CGCATTTTGA TATTATCATC
ACCTCACTTG GGGTTAACGA TGTTACTTCA TCCATAAGTT GCGATACTTG GCTTGATCAG
CAAGAACAAC TATTCAAACT ATTAACCCAG CGTTATAGCC CAACCCACAT TTTGGTCACG
GCAGTCCCGC CGCTGGGATT ATTTCCCGCA CTGCCTAATC CATTGCGCTG GATCTTAGGC
CAAAGAGCAA CTCGCTTTAA TCAAGCATTA CAGCAATTAC TGCTTATCCT AGGACAGCAA
ACAGGGAAGC CTGGGTTTGG CCAGCTTAAC CACCCGACTC GCTTTAGCTT GATTAATTTG
CCATTAGATA AGCCTTCATC AGAAACGAGC ATGTTAGCCT TTATGAGGCA GGTGATGGCC
GTTGATGGAT TCCACCCTGG CCCGCAAATC TACACTGCAT GGGCCAAACG CATTACAGAG
GAGATTAAGC GGGATAACGG GTGA
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| Protein sequence | MLHKGISLLL APLLLLQGLQ VRRTTPRLAE PKGERMGQTG DNPSLSVLIL GDSAALGVGV
DNQQDALLGQ VIHHLKPFGE LSFSLFAKTG ATTASTLQTL EKNLHGKHPI LSQAHFDIII
TSLGVNDVTS SISCDTWLDQ QEQLFKLLTQ RYSPTHILVT AVPPLGLFPA LPNPLRWILG
QRATRFNQAL QQLLLILGQQ TGKPGFGQLN HPTRFSLINL PLDKPSSETS MLAFMRQVMA
VDGFHPGPQI YTAWAKRITE EIKRDNG
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