| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1875 |
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| Symbol | |
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| ID | 4018363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2200598 |
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| End bp | 2201572 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955896 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_562881 |
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| Protein GI | 91793230 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAT TATTAGAAAG AAAACGGCAC TATTTCAGCA TAATTAGCGA ATATATTGGA
ACGATAATGA GCCGAGCAAA ATCAACCTTA GAGCAGTGGC GCATTTTACA GGCGGTGGTC
GATCACGGCG GCTATGCTCA GGCCGCTGAA AAACTCAATA AAAGCCAATC TTCGCTCAAC
CATGCGGTGG CCAAATTACA GCACCAATTA GGCATTCCTT TACTCGAAGT AAAAGGCCGC
AAGGCCTATT TAACCGAGCA AGGTGAAGTT ATGCTGCGCC GCTCTCGCCA CCTCACTCAG
ACCGTCGAGG AACTTGAGCA GCTAGCCCAT AACCTAGAGC AAGGCTGGGA GCCCAGTTTA
ACCCTAGGCA GAGAAATCAT CTATCCTATG CCCTTGCTTG TCGCTGCGTT AAAAGCCTTC
CTTCCCCACA GCCGCGGCAC CCGAGTCACT ATTTTAGACA CTGTGCTATC GGGCACCAAT
GAGCTTATTA ACGCGCAAAG TGTCGACATT TCCATTTGTG CAGTCCCTCC TAAGGGCTAT
ATCAGTGAAC CCTTATGTGA AATGGAGTTT TATCTGGTAT CACACCCAAG CCATCCCTTG
GCACAACTCA CCCAGGTTGA CGATGATAAG CAGTTGGCTC AGCATCTGCA GCTCGTTATC
AAAGACACTG GCACCCTAGG GAGCTCAGAC ACGGGTTGGC TCAAGGCTGA GCAACGTTGG
ACGGTGGCTA ACTTTCATGA GGCGAAAGAA ATTCTCAATC AGGAAATGGG GTTTTGCTGG
ATGCCAAGGT TGCTTGTAGA ACAAGACTTG ACCGAAGGCA GGCTGGCGCG GATTTACTTG
CTTGGCAGTC AAAGCCGCAA GGCTATGATG TCATTGGTTA TTCCAAACCG TGACAGGCAA
GGCCCAGCGG CTAAGTTACT AGAACAGTGT ATATTGCAGC AACACAAACA AGCACAAAGC
GACATTGAGC AGTGA
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| Protein sequence | MFELLERKRH YFSIISEYIG TIMSRAKSTL EQWRILQAVV DHGGYAQAAE KLNKSQSSLN
HAVAKLQHQL GIPLLEVKGR KAYLTEQGEV MLRRSRHLTQ TVEELEQLAH NLEQGWEPSL
TLGREIIYPM PLLVAALKAF LPHSRGTRVT ILDTVLSGTN ELINAQSVDI SICAVPPKGY
ISEPLCEMEF YLVSHPSHPL AQLTQVDDDK QLAQHLQLVI KDTGTLGSSD TGWLKAEQRW
TVANFHEAKE ILNQEMGFCW MPRLLVEQDL TEGRLARIYL LGSQSRKAMM SLVIPNRDRQ
GPAAKLLEQC ILQQHKQAQS DIEQ
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