Gene Sden_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1844 
Symbol 
ID4018327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2170799 
End bp2171491 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID637955861 
Producthypothetical protein 
Protein accessionYP_562851 
Protein GI91793200 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.106534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAT TTAGTTTATT GGGTGCCTTT TTGGTGGGTT TGATGGGCGC CGCCCACTGC 
TTTGGCATGT GTGGCGGCCT AGTGGGACTG TTTTCAAACT CAATCCCCAC AGCCCCTGGC 
CGTAATTTCT TGTCCCATCA ATTGGGATTT TTACTCAGTT ACAACCTAGG TAGGATAACC 
AGCTACGCCT TTGCGGGCGC ACTCGTGGGT GGCAGCAGCG CCATGCTAGG TCAGCTGTTT 
GCCATAGATA ACTACCTTAT CTTATTGCGG GTTTTGGCTG GGGTCATGAT GATCTTAACG 
GGGCTTTATA TTGCCAAAAT TTGGTTTTTA ATTGCCAAGA TTGAAGGCTT GGGCAAGTAC 
GTCTGGCGCT ACATTTCGCC CTTGACCCAG CGCTTTAGTC GCATACAACA CAAGCGTGAA 
GCACTGATGG CGGGCATGAT CTGGGGCTGG CTGCCTTGCG GCTTAGTCTA CAGCACCTTG 
ACTTGGTCGG TGGCTGCTGG CAATGCCCTT GAGGGCGCGC TTATCATGCT GTGTTTTGGC 
TTAGGCACCT TACCAGCATT ATTGTCAGCG GGCTTTGCCG CCAAAGCGTT AGCCAATCTG 
GTTCAAAAAA AAGCCGTACG CTTAGCCAGT GGCGGTTTGT TAATTTTATT TGGAATACAA 
ACACTTTACA TCGCCATAAT GCAGCTAAGC TAG
 
Protein sequence
MIEFSLLGAF LVGLMGAAHC FGMCGGLVGL FSNSIPTAPG RNFLSHQLGF LLSYNLGRIT 
SYAFAGALVG GSSAMLGQLF AIDNYLILLR VLAGVMMILT GLYIAKIWFL IAKIEGLGKY 
VWRYISPLTQ RFSRIQHKRE ALMAGMIWGW LPCGLVYSTL TWSVAAGNAL EGALIMLCFG 
LGTLPALLSA GFAAKALANL VQKKAVRLAS GGLLILFGIQ TLYIAIMQLS