| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1830 |
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| Symbol | |
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| ID | 4018313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2156080 |
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| End bp | 2156808 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955847 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_562837 |
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| Protein GI | 91793186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCC CAACCAATAC TCATAAGCGC AGCCCATTTT CCTCATTAAG CAGGAATAAT
CCTGGCAAAA GCGCTTTTGC TAAGCAAAGA CCCACTAAAA AACCTATCAG TAAACCGTCG
GTGGCCAATC CTGTGATGGT GCTATTTAAT AAACCATTCG ATGTGTTATG CCAATTCACC
GATGAAGCGG GAAGAAAAAC CCTAAAAGAT TTTATCCCTG TGCCAGGCGT GTATGCTGCA
GGCAGATTAG ATAGAGACAG CGAAGGCTTA TTGCTACTGA CCAACGACGG TAAATTTCAA
TCAAAGCTCA CAGAGCCTAA ACAAAAAACC TTTAAAACCT ATTGGGTGCA AGTAGAAGGT
GAGCCAAACC AAGCCGCAAT TGATGCACTG TGTGCAGGGG TCGAGCTTAA AGATGGCATG
ACACTGCCCG CAAAAGTGCG ATTAATGGCA ACGCCCGATG TCTGGCCTCG CACCCCGCCA
GTGCGTGAGC GTCAATCCAT ACCCACCGCG TGGCTTGAAG TGCAAATTTG TGAAGGACGT
AATCGACAAG TACGGCGTAT GACGGCTCAT GTCGGCCACC CAACGTTAAG ATTAATCCGT
TATAAAATAG GCCAATGGAG TCTAGATGAT CTGAATAATG GCGATTACAA GTTACTTAAT
ATCGATGGCA GCGCCCTCGA TGAAACGGCC TTTAAGCAAA TAACAGCAAA TGGTAAGACA
CAGGGTTGA
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| Protein sequence | MSRPTNTHKR SPFSSLSRNN PGKSAFAKQR PTKKPISKPS VANPVMVLFN KPFDVLCQFT
DEAGRKTLKD FIPVPGVYAA GRLDRDSEGL LLLTNDGKFQ SKLTEPKQKT FKTYWVQVEG
EPNQAAIDAL CAGVELKDGM TLPAKVRLMA TPDVWPRTPP VRERQSIPTA WLEVQICEGR
NRQVRRMTAH VGHPTLRLIR YKIGQWSLDD LNNGDYKLLN IDGSALDETA FKQITANGKT
QG
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