| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1763 |
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| Symbol | |
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| ID | 4018241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2083996 |
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| End bp | 2084337 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955776 |
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| Product | helix-turn-helix, HxlR type |
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| Protein accession | YP_562770 |
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| Protein GI | 91793119 |
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| COG category | [K] Transcription |
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| COG ID | [COG1733] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.168632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAC CATTACCCAA AACACAGGTG AGAGGCTCCA ACTCAGGGGT CGCCATCATG
GCAGTATTTG ACCTTCTAGG TCGGAAATGG AACATGAGAA TACTCTGGGA GCTTAACAGG
GGAAGCTTGA GCTTTAGAGG ATTACAAGCA TGCTGTGACG ACATGTCACC GTCAGTATTA
AACACCAGAA TTAAACAGCT AACGACAGCT GAGTTACTGT GCTCAACCCC TCAAGGATAC
CAATTAACTG ACCTAGGCTT GTCATTAATG GTAACACTCG ATCCCTTAAG GGAGTGGTCG
GCGCAATGGG AAGCGAGCAC AAGGCTAAAT CCCACCAAGT AG
|
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| Protein sequence | MKTPLPKTQV RGSNSGVAIM AVFDLLGRKW NMRILWELNR GSLSFRGLQA CCDDMSPSVL
NTRIKQLTTA ELLCSTPQGY QLTDLGLSLM VTLDPLREWS AQWEASTRLN PTK
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