| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1703 |
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| Symbol | |
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| ID | 4018181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2005757 |
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| End bp | 2006371 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955716 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_562710 |
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| Protein GI | 91793059 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.043412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GTATAGTGCA GGCCAAATGT GAGCTGCTTA ACATAGAGGA AAGCCCAGGA
CTCAAAACCT TTGAAGTCGC CATGACCCAG ACGCTAGTGA AAGGATTAAT TCCTGGGGCG
AGTGTTGCCA ATAATGGCGT GTGCCTGACA GTCACCAAGG TGTTAAATGA TAAGGTGTTC
TTTGATGTAA TGGAAGAAAC ATTAGCCTTA ACCAATTTAG CCAACTTAAG CCTCAGTGAT
AGCATCAACA TTGAACGTTC ATTAACCTTT GGCAGTGAAA TTGGCGGTCA CATTTTATCT
GGGCATGTGC ATTGCCAGGC TAGAGTGAGC GCAATTAGCC GCACTGACAG TCATTACAAT
ATAGAAGTCG AACTCGCACC CCAATGGATG AATTACATTT TCTATAAGGG CTTTGTGGGA
GTCAATGGCT GCAGTTTAAC TGTGGGTAAA GTGAATAAAA CGGGTTTTAT TTTGCACCTT
ATTCCGGAAA CCTTGGCGTT AACCAATTTA AGTGAGCTAG CGGTAGGCGA CTTCGTCAAT
ATAGAAATAG ACAGTCAGAC ACAAGTCATT GTCGACACGG TTGAGCGAGT GCTAGCCCAG
CGAGGCATAA GCTAA
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| Protein sequence | MFTGIVQAKC ELLNIEESPG LKTFEVAMTQ TLVKGLIPGA SVANNGVCLT VTKVLNDKVF
FDVMEETLAL TNLANLSLSD SINIERSLTF GSEIGGHILS GHVHCQARVS AISRTDSHYN
IEVELAPQWM NYIFYKGFVG VNGCSLTVGK VNKTGFILHL IPETLALTNL SELAVGDFVN
IEIDSQTQVI VDTVERVLAQ RGIS
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