| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1672 |
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| Symbol | |
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| ID | 4018148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1942657 |
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| End bp | 1943970 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955683 |
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| Product | major facilitator transporter |
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| Protein accession | YP_562679 |
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| Protein GI | 91793028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000523239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACAACGT CTAACCCAAA ACGATTGATT TGGGGCCTGT GCATCGCGTC TGTGATCATT
TATTTGAATT TGTACCTGAT GCAAGGCATG TTACCTGCCA TTGCCGAGCA TTTTCAGGTG
ACAGGCGCCA GCGCCGCCTT GGTATTGTCT GTCACTAGCT TCAGCCTCGC CTTTTCTTTA
CTCATGTTTG CCTTGATTTC CGATAGAGTC GGCAGGTTAG GGCCTATCAT CACCACCTTG
TGGTTATTGG TGGCATCAAA TGTCTTGCTT ATCTTAGTGC AAGACTTTGA AACCTTAATG
GCACTGCGCT TATTACAAGG CGTGTTGCTG GCCGGTGTGC CTGCCATCGC CATGGCCTAT
ATGAAAGAGC AATTATCGGC GGCATTCATC TTAAAGGCCG CGGCCATTTA CATCATGGCC
AATAGCTTAG GGGGCATTTT AGGACGTCTT GTGGGCGGAG TATTATCCCA ATACTTTGAT
TGGCAGCAGG GCATGATAAT ACTGTTTGCT GTGACCCTGA TGGGGGTGGC ATTGGTGCAC
TATTTGCTAA TGAGTAATCT GCTAATTAGG AATCTGCTAA TAAGCAATAG TAGGTTAAAC
ACATCGATTA ATGCGGCTAC AACCAGCGTG CTCAATGAAG CGCTGAACAA CGTACTTGCT
GCAAATCAGC CGCCACATTT GTCTAATGGG GCGGCGACTC AATCTCAGGG GTTGAGTCAA
CAAGCCAAAC TTAGGCTGGA TATGGCGGGC TTTCTATACC ATCTAAAGGA CTCCCAAATG
CGGCTCGCCT TTATCCTCGG CGGCCTTGCT TTCTTTGTGA TGGTGAATCA ATTTAGCTTT
ATTCAGCTGC ACTTGATGGC CGCCCCCTAT GGCTTAAGCC GCTTGCAAGC GACGCTGATT
TTCCTGTGTT ATTTAAGCGG GACGCTTGCC TCTTATTTAT CTGCCCGCTG GATAGCTAAA
TTTGGCAGCC TGCCGTTATT TAAGCTAGCG CTAGGCTTAA TGCTGCTGGG CAGCACACTG
ACATTATTCA ATACGTTAGC CACGATTGTG ATGGGCTTTT TATTCACAGC GGCAGGATTT
TTTCTGACTC ACAGTTGTTG TAATGCGTTT GTGACCATGC GGGCCCAAAG CCACAGGGCC
AAGGCGACTG CATTGTATTT ATGCAGCTAT TATTTAGGTG CCGCCTTGGG TGGGCCCTAT
TTAATGCTAT TTTGGCAGCA GGCGCAGTGG AGCGGTGTGG TGGCAGGCTC GCTAATCATC
TTAACCTTAT TGGCTTTTGT TATTGCTAAG CTTGAACGCT TGCAAACAAG ATAA
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| Protein sequence | MTTSNPKRLI WGLCIASVII YLNLYLMQGM LPAIAEHFQV TGASAALVLS VTSFSLAFSL
LMFALISDRV GRLGPIITTL WLLVASNVLL ILVQDFETLM ALRLLQGVLL AGVPAIAMAY
MKEQLSAAFI LKAAAIYIMA NSLGGILGRL VGGVLSQYFD WQQGMIILFA VTLMGVALVH
YLLMSNLLIR NLLISNSRLN TSINAATTSV LNEALNNVLA ANQPPHLSNG AATQSQGLSQ
QAKLRLDMAG FLYHLKDSQM RLAFILGGLA FFVMVNQFSF IQLHLMAAPY GLSRLQATLI
FLCYLSGTLA SYLSARWIAK FGSLPLFKLA LGLMLLGSTL TLFNTLATIV MGFLFTAAGF
FLTHSCCNAF VTMRAQSHRA KATALYLCSY YLGAALGGPY LMLFWQQAQW SGVVAGSLII
LTLLAFVIAK LERLQTR
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