Gene Sden_1661 details

Gene Information

• Locus tag: Sden_1661
• Symbol: bioD
• ID: 4018137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1929229
• End bp: 1929924
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637955672
• Product: dithiobiotin synthetase
• Protein accession: YP_562668
• Protein GI: 91793017
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTATTTT TCGTAACAGG CACAGACACA GACAGCGGTA AAACCTTAGT GTCAGCCACA 
TTGTTATCCT TGGCACGTGG CCAGAAAACC GGGGTTAAAC CCCTAGCCTC TGGGTGCATG 
CAAACAGCTA ACGGCCTTAG AAACTCTGAT GCACTACAGT TAATGGCTCA TTCAAACATG 
GGGCTGAGTT ACCAGAGGGT GAATCCCATC GCTTTTGAGG CTGCGATTGC GCCCCATATC 
GCGGCAAAAC GCGCTGGCTT TAGCCTCACT CTTGATGCAA TAGATGCGGC TATGCCTTGG 
ACACAGCTTT ATACTGCTGA TTTCGCCTTG ATTGAAGGGG CGGGAGGCTG GCGTTTACCC 
TTGGGAGACG GGCATTATTT GTCTGAGCTT GTACAGCGTT GGAATACGAG GTTGCAAGAG 
AGACACCGCC AGTTAGGGGT TATTCTTGTT GTGGGCATGA AGCTAGGTTG TTTGAATCAT 
GCCTTACTGA CCCAAGAGGC TATTGTTAAT GACGGTCTTA CCATTGTCGG CTGGGTGGCG 
AATCAAGTGG ACAAAGACAT GGCTTGTATT GAAGACAATC TCGACAGCCT GAAGCAGATG 
ATGTTGGGTG AGTTTTTAGG TTATGTGCCA TTTCTCCCTG AACCTAGCCC GCAGGCGGCC 
GGTAATTATA TCAGTGTGGA ATGTTTAATC AGTTAA 

 

Protein sequence

MVFFVTGTDT DSGKTLVSAT LLSLARGQKT GVKPLASGCM QTANGLRNSD ALQLMAHSNM 
GLSYQRVNPI AFEAAIAPHI AAKRAGFSLT LDAIDAAMPW TQLYTADFAL IEGAGGWRLP 
LGDGHYLSEL VQRWNTRLQE RHRQLGVILV VGMKLGCLNH ALLTQEAIVN DGLTIVGWVA 
NQVDKDMACI EDNLDSLKQM MLGEFLGYVP FLPEPSPQAA GNYISVECLI S