| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1624 |
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| Symbol | |
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| ID | 4018099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1887733 |
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| End bp | 1888653 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955634 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_562631 |
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| Protein GI | 91792980 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.142246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACAC CCTTATTGTC TGCGCCGTTA ACATCAGTCC CGTTAACCCT AAGTCTTGAA
CATATCAGTC TGAGCGCCAA GCGCTACGGC GTGGCAGATA AGCCCATTAT ACTGGCGCTG
CATGGCTGGC TTGATAATGC CGACAGCTTT GCACCATTAG CCGCCGCTAT GGCTGAAAAT
GGTTTGTTGG ATGCGTTTCA ATTGTTGGCT ATCGATTGGC CGGGCCACGG TTTATCTGAA
CATAGAAAAG GCGCATATCC GCTGCATTGG ATAGATTATA TATTTGATTT AGATGTGCTT
ATCGAACATC TGCAGCAAGA TAATAATAGC CAAGAAATCA TTCTGCTTGG GCACTCTTTA
GGGGGCATCA TCGCCTCAGC TTACAACGCC AGTTTCCCCG ACAAGGTGTC CCAGTTGATC
TTGATTGAAG CTTTGGCGCC CCTGTTTGAG TCTGTGGACA AATCCAAACT CAGGCTACAA
AAAAGCATAG AGCAACATAA AAAGTTTAAC CTTAAGCGTG AAAAACCACC TGTTTATTAT
CCAAGCCTTG AACTCCTCAG CCAAGCGAGA CACAAACTCA CTGGACTTGG GCTAAATTGG
TGTGAGTTAT TGATGGCCCG CAATACTGAG CTTACCCTCA AGGGGTATCG ATGGCGCAGC
GATCCACGGC TTAAATTGGA CTCAGCCTAT CGTTTTACCT TCGAGCAAGT TGATGCCTTG
ATGACCTACA CTCAGACACC TTGCCTAGTG GTGCTCGGGG AGAATGGCTT TGAACAGCTC
AAGCAGCAAA TGTTGACCAT AGACAAGTGG TTTGAAAACA CCAGTCAGGT ATTACTTGAA
GGTGACCATC ATCTGCATAT GGGGAATGCC ACTGGGGTTG CGGCGAAAAT CAGTGATTTT
ATCCATGGAT TAAATCGCTA G
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| Protein sequence | MPTPLLSAPL TSVPLTLSLE HISLSAKRYG VADKPIILAL HGWLDNADSF APLAAAMAEN
GLLDAFQLLA IDWPGHGLSE HRKGAYPLHW IDYIFDLDVL IEHLQQDNNS QEIILLGHSL
GGIIASAYNA SFPDKVSQLI LIEALAPLFE SVDKSKLRLQ KSIEQHKKFN LKREKPPVYY
PSLELLSQAR HKLTGLGLNW CELLMARNTE LTLKGYRWRS DPRLKLDSAY RFTFEQVDAL
MTYTQTPCLV VLGENGFEQL KQQMLTIDKW FENTSQVLLE GDHHLHMGNA TGVAAKISDF
IHGLNR
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